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View Structure Prediction Details

Protein: MIND1_ARATH
Organism: Arabidopsis thaliana
Length: 326 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MIND1_ARATH.

Description E-value Query
Range
Subject
Range
gi|146297750, gi... - gi|82500912|ref|ZP_00886301.1| ATPases involved in chromosome partitioning [Caldicellulosiruptor sac...
238.0 [0..58] [306..2]

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Predicted Domain #1
Region A:
Residues: [1-65]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASLRLFSTN HQSLLLPSSL SQKTLISSPR FVNNPSRRSP IRSVLQFNRK PELAGETPRI  60
   61 VVITS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 19.522879
Match: 2qy9A
Description: No description for 2qy9A was found.

Predicted Domain #2
Region A:
Residues: [66-326]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GKGGVGKTTT TANVGLSLAR YGFSVVAIDA DLGLRNLDLL LGLENRVNYT CVEVINGDCR  60
   61 LDQALVRDKR WSNFELLCIS KPRSKLPMGF GGKALEWLVD ALKTRPEGSP DFIIIDCPAG 120
  121 IDAGFITAIT PANEAVLVTT PDITALRDAD RVTGLLECDG IRDIKMIVNR VRTDMIKGED 180
  181 MMSVLDVQEM LGLSLLGVIP EDSEVIRSTN RGFPLVLNKP PTLAGLAFEQ AAWRLVEQDS 240
  241 MKAVMVEEEP KKRGFFSFFG G

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 37.69897
Match: 1hyqA
Description: Cell division regulator MinD
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
nucleoside-triphosphatase activity 1.70951650603803 bayes_pls_golite062009
pyrophosphatase activity 1.67001321748055 bayes_pls_golite062009
hydrolase activity, acting on acid anhydrides 1.65957796124263 bayes_pls_golite062009
hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides 1.65897844340974 bayes_pls_golite062009
binding 1.15787013909653 bayes_pls_golite062009
hydrolase activity 0.86097911121458 bayes_pls_golite062009
catalytic activity 0.828877635849693 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle