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View Structure Prediction Details

Protein: gi|15237923, gi|...
Organism: Arabidopsis thaliana
Length: 746 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15237923, gi|....

Description E-value Query
Range
Subject
Range
gi|71279274, gi|... - gi|71279274|ref|YP_267848.1| dipeptidyl peptidase IV [Colwellia psychrerythraea 34H], gi|71145014|gb...
367.0 [0..4] [745..33]

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Predicted Domain #1
Region A:
Residues: [1-746]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADKDVPFGV EDIVQTPLPG YVAPTAVSFS PDDSLITYLF SPEKNLKRRV YAFDVNKGES  60
   61 NLVFSPPDGG VDESNISPEE KLRRERLRER GLGVTRYEWV KTNSKMRFIV VPLPAGVYMK 120
  121 DLSSSPNPEL IVPSSPTSPI IDPRLSPNGL FLAYVRESEL HVLNLLKNQT QQLTSGANGS 180
  181 TLSHGLAEYI AQEEMDRRNG YWWSLDSKFI AYTEVDSSQI PLFRIMHQGK RSVGSEAQED 240
  241 HAYPFAGALN STLRLGVVSS AGGGKTTWMN LVCGGRGNTE DEYLGRVNWL PGNVLIVQVL 300
  301 NRSQSKLKII SFDINTGQGN VLLTEESDTW VTLHDCFTPL EKVPSSRGSG GFIWASERTG 360
  361 FRHLYLYESD GTCLGAITSG EWMVEQIAGV NEPMSLVYFT GTLDGPLETN LYCAKLEAGN 420
  421 TSRCQPMRLT HGKGKHIVVL DHQMKNFVDI HDSVDSPPRV SLCSLSDGTV LKILYEQTSP 480
  481 IQILKSLKLE PPEFVQIQAN DGKTTLYGAV YKPDSSKFGP PPYKTMINVY GGPSVQLVYD 540
  541 SWINTVDMRT QYLRSRGILV WKLDNRGTAR RGLKFESWMK HNCGYVDAED QVTGAKWLIE 600
  601 QGLAKPDHIG VYGWSYGGYL SATLLTRYPE IFNCAVSGAP VTSWDGYDSF YTEKYMGLPT 660
  661 EEERYLKSSV MHHVGNLTDK QKLMLVHGMI DENVHFRHTA RLVNALVEAG KRYELLIFPD 720
  721 ERHMPRKKKD RIYMEQRIWE FIEKNL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 79.39794
Match: 2bgrA
Description: Crystal structure of HIV-1 Tat derived nonapeptides Tat(1-9) bound to the active site of Dipeptidyl peptidase IV (CD26)
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
hydrolase activity 2.54323107406855 bayes_pls_golite062009
catalytic activity 1.76673721118052 bayes_pls_golite062009
peptidase activity 1.12259137179218 bayes_pls_golite062009
peptidase activity, acting on L-amino acid peptides 0.808794364499195 bayes_pls_golite062009
dipeptidyl-peptidase activity 0.62541385223733 bayes_pls_golite062009
hydrolase activity, acting on ester bonds 0.112278861211575 bayes_pls_golite062009
serine hydrolase activity 0.08085624250764 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle