| Protein: | PGTB1_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 375 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PGTB1_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
312.0 | [0..27] | [375..10] |
|
Region A: Residues: [1-375] |
1 11 21 31 41 51
| | | | | |
1 MSETAVSIDS DRSKSEEEDE EEYSPPVQSS PSANFEKDRH LMYLEMMYEL LPYHYQSQEI 60
61 NRLTLAHFII SGLHFLGARD RVDKDVVAKW VLSFQAFPTN RVSLKDGEFY GFFGSRSSQF 120
121 PIDENGDLKH NGSHLASTYC ALAILKVIGH DLSTIDSKSL LISMINLQQD DGSFMPIHIG 180
181 GETDLRFVYC AAAICYMLDS WSGMDKESAK NYILNCQSYD GGFGLIPGSE SHGGATYCAI 240
241 ASLRLMGYIG VDLLSNDSSS SIIDPSLLLN WCLQRQANDG GFQGRTNKPS DTCYAFWIGA 300
301 VLKLIGGDAL IDKMALRKFL MSCQSKYGGF SKFPGQLPDL YHSYYGYTAF SLLEEQGLSP 360
361 LCPELGLPLL AAPGI
|
| Detection Method: |  |
| Confidence: | 81.30103 |
| Match: | 1n4pB |
| Description: | Protein Geranylgeranyltransferase type-I Complexed with Geranylgeranyl Diphosphate |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| protein geranylgeranyltransferase activity | 12.5056881810294 | bayes_pls_golite062009 |
| prenyltransferase activity | 11.2095419035102 | bayes_pls_golite062009 |
| CAAX-protein geranylgeranyltransferase activity | 10.5569796788906 | bayes_pls_golite062009 |
| protein prenyltransferase activity | 8.21177558804895 | bayes_pls_golite062009 |
| Rab geranylgeranyltransferase activity | 6.2955313775009 | bayes_pls_golite062009 |
| protein farnesyltransferase activity | 4.15546866363415 | bayes_pls_golite062009 |
| binding | 1.68564752993879 | bayes_pls_golite062009 |
| protein binding | 1.45455287827127 | bayes_pls_golite062009 |
| transferase activity | 1.0950430724883 | bayes_pls_golite062009 |
| enzyme regulator activity | 0.854896924803117 | bayes_pls_golite062009 |
| catalytic activity | 0.497699107100544 | bayes_pls_golite062009 |
