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View Structure Prediction Details

Protein: ALAT2_ARATH
Organism: Arabidopsis thaliana
Length: 540 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ALAT2_ARATH.

Description E-value Query
Range
Subject
Range
gi|21954069 - gi|21954069|gb|AAK59591.2| putative alanine aminotransferase [Arabidopsis thaliana]
419.0 [0..9] [540..1]

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Predicted Domain #1
Region A:
Residues: [1-112]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRRFLINQAK GLVDHSRRQH HHKSPSFLSP QPRPLASSPP ALSRFFSSTS EMSASDSTSS  60
   61 LPVTLDSINP KVLKCEYAVR GEIVNIAQKL QEDLKTNKDA YPFDEIIYCN IG

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 5.522879
Match: 2ra5A
Description: No description for 2ra5A was found.

Predicted Domain #2
Region A:
Residues: [113-540]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NPQSLGQLPI KFFREVLALC DHASLLDESE THGLFSTDSI DRAWRILDHI PGRATGAYSH  60
   61 SQGIKGLRDV IAAGIEARDG FPADPNDIFL TDGASPAVHM MMQLLLSSEK DGILSPIPQY 120
  121 PLYSASIALH GGSLVPYYLD EATGWGLEIS DLKKQLEEAR SKGISVRALV VINPGNPTGQ 180
  181 VLAEENQRDI VNFCKQEGLV LLADEVYQEN VYVPDKKFHS FKKVARSLGY GEKDISLVSF 240
  241 QSVSKGYYGE CGKRGGYMEV TGFTSDVREQ IYKMASVNLC SNISGQILAS LVMSPPKPGD 300
  301 DSYDSYMAER DGILSSMAKR AKTLEDALNS LEGVTCNRAE GAMYLFPRIN LPQKAIEAAE 360
  361 AEKTAPDAFY CKRLLNATGV VVVPGSGFGQ VPGTWHFRCT ILPQEDKIPA IVNRLTEFHK 420
  421 SFMDEFRN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 87.522879
Match: 1j32A
Description: Aspartate aminotransferase, AAT
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
L-aspartate:2-oxoglutarate aminotransferase activity 5.51961002550688 bayes_pls_golite062009
catalytic activity 2.29878871754893 bayes_pls_golite062009
4-aminobutyrate transaminase activity 1.82501790383768 bayes_pls_golite062009
glycine dehydrogenase (decarboxylating) activity 1.63055151623667 bayes_pls_golite062009
oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor 1.63055151623667 bayes_pls_golite062009
transferase activity 1.44093490824786 bayes_pls_golite062009
transferase activity, transferring nitrogenous groups 1.28316822767388 bayes_pls_golite062009
transaminase activity 1.24990480711889 bayes_pls_golite062009
L-alanine:2-oxoglutarate aminotransferase activity 1.06988190956423 bayes_pls_golite062009
alanine-oxo-acid transaminase activity 1.06988190956423 bayes_pls_golite062009
hydrolase activity, acting on acid carbon-carbon bonds, in ketonic substances 0.942545094747784 bayes_pls_golite062009
hydrolase activity, acting on acid carbon-carbon bonds 0.845816961387768 bayes_pls_golite062009
N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity 0.753443687983955 bayes_pls_golite062009
binding 0.536634592992536 bayes_pls_golite062009
transferase activity, transferring acyl groups 0.319452731970428 bayes_pls_golite062009
pyridoxal phosphate binding 0.16957228630576 bayes_pls_golite062009
vitamin B6 binding 0.16957228630576 bayes_pls_golite062009
aromatic-amino-acid:2-oxoglutarate aminotransferase activity 0.0916183433120769 bayes_pls_golite062009
kynureninase activity 0.0900983660305177 bayes_pls_golite062009
cystathionine beta-lyase activity 0.0833010353195099 bayes_pls_golite062009
nucleic acid binding 0.013097682076602 bayes_pls_golite062009

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