| Protein: | gi|12322942, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 615 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|12322942, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
680.0 | [0..1] | [606..1] |
|
Region A: Residues: [1-94] |
1 11 21 31 41 51
| | | | | |
1 METGNVVNAQ PELSGIIDGS KSYMYEQLWK LCAGPLCDIP KLGENVYYFP QGNIELVDAS 60
61 TREELNELQP ICDLPSKLQC RVIAIHLKVE NNSD
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [95-246] |
1 11 21 31 41 51
| | | | | |
1 ETYAEITLMP DTTQVVIPTQ SENQFRPLVN SFTKVLTASD TSAYGGFFVP KKHAIECLPP 60
61 LDMSQPLPAQ ELLAKDLHGN QWRFRHSYRG TPQRHSLTTG WNEFTTSKKL VKGDVIVFVR 120
121 GETGELRVGI RRARHQQGNI PSSIVSIDCM RH
|
| Detection Method: | |
| Confidence: | 30.39794 |
| Match: | 1widA |
| Description: | Solution Structure of the B3 DNA-Binding Domain of RAV1 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [247-395] |
1 11 21 31 41 51
| | | | | |
1 GVIASAKHAL DNQCIFIVVY KPRSSQFIVS YDKFLDAMNN KFIVGSRFTM RFEGDDFSER 60
61 RYFGTIIGVN DFSPHWKCSE WRSLEVQWDE FASFSRPNKV SPWEIEHLMS ALNVPRSSLL 120
121 KNKRLRETLE YLLNILVLYT CSSSSHILP
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [396-504] |
1 11 21 31 41 51
| | | | | |
1 PILTQGQEIG QLSVASPMNT SLRYRDTTED AMNPSRLLMS YPVQPMPKLN YNNQMVTQIE 60
61 ENITTKAVTN FRLFGVSLAI PLVIKDPIEE IGSDISKLTE GKKFGQSQT
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [505-615] |
1 11 21 31 41 51
| | | | | |
1 LRSPIEIQSK QFGSTRTCTK VQMQGVTIGR AVDLSVLNGY DQLILELEKL FDLKGQLQTR 60
61 NQWKIAFTDS DGYEMLVGDD PWPEFCKMVK KILIYSKEEV KNLKSSKSLS S
|
| Detection Method: | |
| Confidence: | 1.15 |
| Match: | 1wj6A |
| Description: | Solution structure of RSGI RUH-024, a PB1 domain in human cDNA, KIAA0049 |
Matching Structure (courtesy of the PDB): |
|
