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Protein Overview: gi|12322942, gi|...

General Information:
Name(s) found: gi|25511690 [NCBI NR]
gi|15219535 [NCBI NR]
gi|12322942 [NCBI NR]
Description(s) found:
Found 6 descriptions.
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  • pir||D86473 69.8K hypothetical protein - Arabidopsis thaliana [NCBI NR]
  • ref|NP_174758.1| transcriptional factor B3 family protein / auxin-responsive factor AUX/IAA-related [Arabidopsis thaliana] [NCBI NR]
  • gi|12322942|gb|AAG51458.1|AC069160_4 hypothetical protein [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 615 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 METGNVVNAQ PELSGIIDGS KSYMYEQLWK LCAGPLCDIP KLGENVYYFP QGNIELVDAS  60
   61 TREELNELQP ICDLPSKLQC RVIAIHLKVE NNSDETYAEI TLMPDTTQVV IPTQSENQFR 120
  121 PLVNSFTKVL TASDTSAYGG FFVPKKHAIE CLPPLDMSQP LPAQELLAKD LHGNQWRFRH 180
  181 SYRGTPQRHS LTTGWNEFTT SKKLVKGDVI VFVRGETGEL RVGIRRARHQ QGNIPSSIVS 240
  241 IDCMRHGVIA SAKHALDNQC IFIVVYKPRS SQFIVSYDKF LDAMNNKFIV GSRFTMRFEG 300
  301 DDFSERRYFG TIIGVNDFSP HWKCSEWRSL EVQWDEFASF SRPNKVSPWE IEHLMSALNV 360
  361 PRSSLLKNKR LRETLEYLLN ILVLYTCSSS SHILPPILTQ GQEIGQLSVA SPMNTSLRYR 420
  421 DTTEDAMNPS RLLMSYPVQP MPKLNYNNQM VTQIEENITT KAVTNFRLFG VSLAIPLVIK 480
  481 DPIEEIGSDI SKLTEGKKFG QSQTLRSPIE IQSKQFGSTR TCTKVQMQGV TIGRAVDLSV 540
  541 LNGYDQLILE LEKLFDLKGQ LQTRNQWKIA FTDSDGYEML VGDDPWPEFC KMVKKILIYS 600
  601 KEEVKNLKSS KSLSS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..94] MSA 1.079982 View MSA. No confident structure predictions are available.
    2 View Details [95..246] PSI-BLAST 30.39794 Solution Structure of the B3 DNA-Binding Domain of RAV1
    3 View Details [247..395] MSA 3.141978 View MSA. No confident structure predictions are available.
    4 View Details [396..504] deduced N/A No confident structure predictions are available.
    5 View Details [505..615] FFAS03 1.15 Solution structure of RSGI RUH-024, a PB1 domain in human cDNA, KIAA0049


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.95

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle