| Protein: | gi|12322942, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 615 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|12322942, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
680.0 | [0..1] | [606..1] |
|
Region A: Residues: [1-94] |
1 11 21 31 41 51
| | | | | |
1 METGNVVNAQ PELSGIIDGS KSYMYEQLWK LCAGPLCDIP KLGENVYYFP QGNIELVDAS 60
61 TREELNELQP ICDLPSKLQC RVIAIHLKVE NNSD
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.623 | N/A | N/A | a.60.1 | SAM/Pointed domain |
| View | Download | 0.486 | N/A | N/A | d.58.18 | Regulatory domain in the aminoacid metabolism |
| View | Download | 0.465 | N/A | N/A | d.58.7 | RNA-binding domain, RBD |
| View | Download | 0.322 | N/A | N/A | d.58.7 | RNA-binding domain, RBD |
| View | Download | 0.318 | N/A | N/A | a.60.1 | SAM/Pointed domain |
| View | Download | 0.300 | N/A | N/A | d.201.1 | SRP19 |
| View | Download | 0.260 | N/A | N/A | d.58.7 | RNA-binding domain, RBD |
|
Region A: Residues: [95-246] |
1 11 21 31 41 51
| | | | | |
1 ETYAEITLMP DTTQVVIPTQ SENQFRPLVN SFTKVLTASD TSAYGGFFVP KKHAIECLPP 60
61 LDMSQPLPAQ ELLAKDLHGN QWRFRHSYRG TPQRHSLTTG WNEFTTSKKL VKGDVIVFVR 120
121 GETGELRVGI RRARHQQGNI PSSIVSIDCM RH
|
| Detection Method: | |
| Confidence: | 30.39794 |
| Match: | 1widA |
| Description: | Solution Structure of the B3 DNA-Binding Domain of RAV1 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [247-395] |
1 11 21 31 41 51
| | | | | |
1 GVIASAKHAL DNQCIFIVVY KPRSSQFIVS YDKFLDAMNN KFIVGSRFTM RFEGDDFSER 60
61 RYFGTIIGVN DFSPHWKCSE WRSLEVQWDE FASFSRPNKV SPWEIEHLMS ALNVPRSSLL 120
121 KNKRLRETLE YLLNILVLYT CSSSSHILP
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.628 | N/A | N/A | c.2.1 | NAD(P)-binding Rossmann-fold domains |
| View | Download | 0.628 | N/A | N/A | c.2.1 | NAD(P)-binding Rossmann-fold domains |
| View | Download | 0.508 | N/A | N/A | d.81.1 | Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain |
| View | Download | 0.508 | N/A | N/A | d.81.1 | Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain |
| View | Download | 0.460 | N/A | N/A | a.95.1 | Influenza virus matrix protein M1 |
| View | Download | 0.460 | N/A | N/A | a.95.1 | Influenza virus matrix protein M1 |
| View | Download | 0.451 | N/A | N/A | c.30.1 | PreATP-grasp domain |
| View | Download | 0.451 | N/A | N/A | c.30.1 | PreATP-grasp domain |
| View | Download | 0.437 | N/A | N/A | c.121.1 | Ribose/Galactose isomerase RpiB/AlsB |
| View | Download | 0.423 | N/A | N/A | c.30.1 | PreATP-grasp domain |
|
Region A: Residues: [396-504] |
1 11 21 31 41 51
| | | | | |
1 PILTQGQEIG QLSVASPMNT SLRYRDTTED AMNPSRLLMS YPVQPMPKLN YNNQMVTQIE 60
61 ENITTKAVTN FRLFGVSLAI PLVIKDPIEE IGSDISKLTE GKKFGQSQT
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.347 | a.7.15 | Description not found. |
|
Region A: Residues: [505-615] |
1 11 21 31 41 51
| | | | | |
1 LRSPIEIQSK QFGSTRTCTK VQMQGVTIGR AVDLSVLNGY DQLILELEKL FDLKGQLQTR 60
61 NQWKIAFTDS DGYEMLVGDD PWPEFCKMVK KILIYSKEEV KNLKSSKSLS S
|
| Detection Method: | |
| Confidence: | 1.15 |
| Match: | 1wj6A |
| Description: | Solution structure of RSGI RUH-024, a PB1 domain in human cDNA, KIAA0049 |
Matching Structure (courtesy of the PDB): |
|
