| Protein: | AT13A_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 603 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for AT13A_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
290.0 | [0..85] | [570..1329] |
|
|
283.0 | [0..85] | [575..1324] |
|
|
282.0 | [0..87] | [563..1325] |
|
|
281.0 | [0..87] | [563..1325] |
|
|
275.0 | [0..87] | [563..1325] |
|
|
275.0 | [0..87] | [563..1325] |
|
|
268.0 | [0..87] | [581..1376] |
|
Region A: Residues: [1-86] |
1 11 21 31 41 51
| | | | | |
1 MDFPENLPSD IGRLEQIVSH FFPKALHIVL NSRIPSLQSR GRTRERLSGL NVRKSDKWFN 60
61 LVMGDRPAAL EKLHSWHRNI LDSMII
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.549 | a.60.8 | HRDC-like |
| View | Download | 0.497 | a.35.1 | lambda repressor-like DNA-binding domains |
| View | Download | 0.497 | a.35.1 | lambda repressor-like DNA-binding domains |
| View | Download | 0.451 | c.44.2 | Enzyme IIB-cellobiose |
| View | Download | 0.418 | a.24.18 | Description not found. |
| View | Download | 0.401 | d.58.4 | Dimeric alpha+beta barrel |
| View | Download | 0.328 | a.151.1 | Glutamyl tRNA-reductase dimerization domain |
| View | Download | 0.309 | a.23.4 | Mitochondrial import receptor subunit Tom20 |
| View | Download | 0.299 | a.163.1 | Crustacean CHH/MIH/GIH neurohormone |
|
Region A: Residues: [87-326] |
1 11 21 31 41 51
| | | | | |
1 DIILVHPISN DNLDDDDDHS DSVVRSAETV IERWVVQYEN PLIMSPQSSD SATRYQKVYK 60
61 KSIILLRSLY AQTRLLPAYR VSRQLSSSLA SSGYDLIYKV SSFSDIFSGP VTETMKEFRF 120
121 APVEVPPGRL CASVTYRSDL SDFNLGAHIT LPPRIITDYV GSPATDPMRF FPSPGRSVEG 180
181 HSFTGRAGRP PLTGSSAERP HSWTSGFHRP PAQFATPNQS FSPAQSHQLS PGLHDFHWSR 240
241
|
| Detection Method: | |
| Confidence: | 35.154902 |
| Match: | 1i3qA |
| Description: | RBP1 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [327-421] |
1 11 21 31 41 51
| | | | | |
1 TDAFGDNHQL SPPFSPSGSP STPRYISGGN SPRINVRPGT APVTIPSSAT LNRYVSSNFS 60
61 EPGRNPLPPF SPKSTRRSPS SQDSLPGIAL YRSSR
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [422-603] |
1 11 21 31 41 51
| | | | | |
1 SGESPSGLMN QYPTQKLSKD SKYDSGRFSG VLSSSDSPRF AFSRSPSRLS SQDDLDDPDC 60
61 SCPFDFDDVD ESGLQYSHSL DRRKTSSSIS QSLPLGRRSS QDAAVGVLVH MLKTAPPLRQ 120
121 DSSTYMASMS GVQREGSVSG TESEFSMARS TSDALEELRN YKQLKDLLLS KSKSGSGPTR 180
181 VH
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
