Protein Overview: gi|4808162

General Information:
Name(s) found:	gi\|4808162 [NCBI NR]
Description(s) found: Found 2 descriptions. SHOW ALL	gi\|4808162\|emb\|CAB42796.1\| largest subunit of the RNA polymerase II complex [Drosophila madeirensis] [NCBI NR]
Organism:	Drosophila madeirensis
Length:	1889 amino acids
Gene Ontology:
Cellular Component:	NONE FOUND
Biological Process:	NONE FOUND
Molecular Function:	NONE FOUND

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTTTDSKAP LRQVKRVQFG ILSPDEIRRM SVTEGGVQFA ETMEGGRPKL GGLMDPRQGV  60
   61 IDRTSRCQTC AGNMTECPGH FGHIDLAKPV FHIGFITKTI KILRCVCFYC SKMLVSPHNP 120
  121 KIKEIVVKSK GQPRKRLAYV YDLCKGKTIC EGGEDMDLTK DNQQPDPNKK PGHGGCGHYQ 180
  181 PSIRRTGLDL SAEWKHPNED SQEKKIVVSA ERVWEILKHI TDEECFILGM DPKYARPDWM 240
  241 IVTVLPVPPL AVRPAVVMFG AAKNQDDLTH KLSDIIKANN ELRKNEASGA AAHVIQENIK 300
  301 MLQFHVATLV DNDMPGMPRA MQKSGKPLKA IKARLKGKEG RIRGNLMGKR VDFSARTVIT 360
  361 PDPNLRIDQV GVPRSIAQNL TFPELVTPFN IDRMQELVRR GNSQYPGAKY IVRDNGERID 420
  421 LRFHPKSSDL HLQCGYKVER HLRDDDLVIF NRQPTLHKMS MMGHRVKVLP WSTFRMNLSC 480
  481 TSPYNADFDG DEMNLHVPQS METRAEVENI HITPRQIITP QANKPVMGIV QDTLTAVRKM 540
  541 TKRDVFITRE QVMNLLMFLP TWDGKMPQPC ILKPRPLWTG KQIFSLIIPG NVNMIRTHST 600
  601 HPDEEDDGPY KWISPGDTKV MVEHGDLIMG ILCKKTLGTS AGSLLHICFL ELGHEIAGRF 660
  661 YGNIQTVINN WLLLEGHSIG IGDTIADPQT YNEIQMAIKK AKDDVINVIQ KAHNMELEPT 720
  721 PGNTLRQTFE NKVNRILNDA RDKTGGSAKK SLTEYNNLKA MVVSGSKGSN INISQVIACV 780
  781 GQQNVEGKRI PYGFRKRTLP HFIKDDYGPE SRGFVENSYL AGLTPSEFYF HAMGGREGLI 840
  841 DTAVKTAETG YIQRRLIKAM ESVMVNYDGT VRNSVGQLIQ LRYGEDGLCG ELVEFQNMPT 900
  901 VKLSNKAFEK RFKFDWSNER YMRKVFTDEV IKEITDSSEA IQDLESEWDN LMHDRDNLRV 960
  961 IFPNGDSKVV LPCNLQRMIW NVQKIFHINK RLPTDLSPMR VIKGVKTLLE RCVIVTGADR1020
 1021 ISKQANENAT LLFQCLIRST LCTKYVSEEF RLSTEAFEWL IGEIETRFQQ AQANPGEMVG1080
 1081 ALAAQSLGEP ATQMTLNTFH FAGVSSKNVT LGVPRLKEII NISKKPKAPS LTVFLTGGAA1140
 1141 RDAEKAKNVL CRLEHTTLRK VTANTAIYYD PDPQRTVISE DQEFVNVYYE MPDFDPTRIS1200
 1201 PWLLRIELDR KRMTDKKLTM EQIAEKINVG FGEDLNCIFN DDNADKLVLR IRIMNNEENK1260
 1261 FQDEDEAVDK MEDDMFLRCI EANMLSDMTL QGIEAIGKVY MHLPQTDSKK RIVITETGEF1320
 1321 KAIGEWLLET DGTSMMKVLS ERDVDPVRTS SNDICEIFQV LGIEAVRKSV EKEMNAVLQF1380
 1381 YGLYVNYRHL ALLCDVMTAK GHLMAITRHG INRQDTGALM RCSFEETVDV LMDAAAHAET1440
 1441 DPMRGVSENI IMGQLPKMGT GCFDLLLDAE KCRFGIEIPN TLGSSMLGGT AMFIGGGSTP1500
 1501 SMTPPMTPWV NCNTPRYFSP PGHVSAMTPG GPSFSPSAAS DASGMSPSWS PAHPGSSPSS1560
 1561 PAPSMSPFYP ASPSVSPSYS PTSPNYTASS PGGASPNYSP SSPNYSPTSP LYAAPSPRYA1620
 1621 STTPNFNPQS TGYSPSASGY SPTSPVYSPT SNFPSSPSFA GSGSNMYSPG NAYSPSSTNY1680
 1681 SPNSPSYSPT SPSYSPSSPS YSPTSPCYSP SSPSYSPTSP NYTPATPSYS PTSPNYSASP1740
 1741 HYSPASPAYS QTGAKYSPTS PTYSPPSPSY DGSPGSPQYT PGSPQYSPAS PKYSPTSPLY1800
 1801 SPSSPQHSPS NQYSPTGSTY SATSPRYSPN MSIYSPSSTK YSPTSPTYTP TARNYSPTSP1860
 1861 MYSPTAPSHY SPTSPAYSPS SPTFEESDD

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.98

Protein Overview: gi|4808162

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: