| Protein: | PP124_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 862 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PP124_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
808.0 | [0..5] | [832..171] |
|
|
740.0 | [0..2] | [832..60] |
|
|
704.0 | [0..6] | [832..102] |
|
|
700.0 | [0..8] | [832..251] |
|
Region A: Residues: [1-207] |
1 11 21 31 41 51
| | | | | |
1 MNLAIPNPNS HHLSFLIQNS SFIGNRRFAD GNRLRFLSGG NRKPCSFSGK IKAKTKDLVL 60
61 GNPSVSVEKG KYSYDVESLI NKLSSLPPRG SIARCLDIFK NKLSLNDFAL VFKEFAGRGD 120
121 WQRSLRLFKY MQRQIWCKPN EHIYTIMISL LGREGLLDKC LEVFDEMPSQ GVSRSVFSYT 180
181 ALINAYGRNG RYETSLELLD RMKNEKI
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [208-313] |
1 11 21 31 41 51
| | | | | |
1 SPSILTYNTV INACARGGLD WEGLLGLFAE MRHEGIQPDI VTYNTLLSAC AIRGLGDEAE 60
61 MVFRTMNDGG IVPDLTTYSH LVETFGKLRR LEKVCDLLGE MASGGS
|
| Detection Method: | |
| Confidence: | 7.0 |
| Match: | 2c0mA |
| Description: | No description for 2c0mA was found. |
|
Region A: Residues: [314-698] |
1 11 21 31 41 51
| | | | | |
1 LPDITSYNVL LEAYAKSGSI KEAMGVFHQM QAAGCTPNAN TYSVLLNLFG QSGRYDDVRQ 60
61 LFLEMKSSNT DPDAATYNIL IEVFGEGGYF KEVVTLFHDM VEENIEPDME TYEGIIFACG 120
121 KGGLHEDARK ILQYMTANDI VPSSKAYTGV IEAFGQAALY EEALVAFNTM HEVGSNPSIE 180
181 TFHSLLYSFA RGGLVKESEA ILSRLVDSGI PRNRDTFNAQ IEAYKQGGKF EEAVKTYVDM 240
241 EKSRCDPDER TLEAVLSVYS FARLVDECRE QFEEMKASDI LPSIMCYCMM LAVYGKTERW 300
301 DDVNELLEEM LSNRVSNIHQ VIGQMIKGDY DDDSNWQIVE YVLDKLNSEG CGLGIRFYNA 360
361 LLDALWWLGQ KERAARVLNE ATKRG
|
| Detection Method: | |
| Confidence: | 34.221849 |
| Match: | 1w3bA |
| Description: | The superhelical TPR domain of O-linked GlcNAc transferase reveals structural similarities to importin alpha. |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [699-777] |
1 11 21 31 41 51
| | | | | |
1 LFPELFRKNK LVWSVDVHRM SEGGMYTALS VWLNDINDML LKGDLPQLAV VVSVRGQLEK 60
61 SSAARESPIA KAAFSFLQD
|
| Detection Method: | |
| Confidence: | 20.69897 |
| Match: | 3ceqA |
| Description: | No description for 3ceqA was found. |
|
Region A: Residues: [778-862] |
1 11 21 31 41 51
| | | | | |
1 HVSSSFSFTG WNGGRIMCQR SQLKQLLSTK EPTSEESENK NLVALANSPI FAAGTRASTS 60
61 SDTNHSGNPT QRRTRTKKEL AGSTA
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
