| Protein: | MB3R1_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 776 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MB3R1_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
478.0 | [0..1] | [776..1] |
|
Region A: Residues: [1-195] |
1 11 21 31 41 51
| | | | | |
1 MKREMKAPTT PLESLQGDLK GKQGRTSGPA RRSTKGQWTP EEDEVLCKAV ERFQGKNWKK 60
61 IAECFKDRTD VQCLHRWQKV LNPELVKGPW SKEEDNTIID LVEKYGPKKW STISQHLPGR 120
121 IGKQCRERWH NHLNPGINKN AWTQEEELTL IRAHQIYGNK WAELMKFLPG RSDNSIKNHW 180
181 NSSVKKKLDS YYASG
|
| Detection Method: |  |
| Confidence: | 70.39794 |
| Match: | 1h88C |
| Description: | c-Myb, DNA-binding domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.334577365229545 | bayes_pls_golite062009 |
| transcription regulator activity | 0.0696342306231097 | bayes_pls_golite062009 |
|
Region A: Residues: [196-420] |
1 11 21 31 41 51
| | | | | |
1 LLDQCQSSPL IALQNKSIAS SSSWMHSNGD EGSSRPGVDA EESECSQAST VFSQSTNDLQ 60
61 DEVQRGNEEY YMPEFHSGTE QQISNAASHA EPYYPSFKDV KIVVPEISCE TECSKKFQNL 120
121 NCSHELRTTT ATEDQLPGVS NDAKQDRGLE LLTHNMDNGG KNQALQQDFQ SSVRLSDQPF 180
181 LSNSDTDPEA QTLITDEECC RVLFPDNMKD SSTSSGEQGR NMVDP
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [421-528] |
1 11 21 31 41 51
| | | | | |
1 QNGKGSLCSQ AAETHAHETG KVPALPWHPS SSEGLAGHNC VPLLDSDLKD SLLPRNDSNA 60
61 PIQGCRLFGA TELECKTDTN DGFIDTYGHV TSHGNDDNGG FPEQQGLS
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [529-698] |
1 11 21 31 41 51
| | | | | |
1 YIPKDSLKLV PLNSFSSPSR VNKIYFPIDD KPAEKDKGAL CYEPPRFPSA DIPFFSCDLV 60
61 PSNSDLRQEY SPFGIRQLMI SSMNCTTPLR LWDSPCHDRS PDVMLNDTAK SFSGAPSILK 120
121 KRHRDLLSPV LDRRKDKKLK RAATSSLAND FSRLDVMLDE GDDCMTSRPS
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [699-776] |
1 11 21 31 41 51
| | | | | |
1 ESPEDKNICA SPSIARDNRN CASARLYQEM IPIDEEPKET LESGGVTSMQ NENGCNDGGA 60
61 SAKNVSPSLS LHIIWYQL
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
