| Protein: | SAC51_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 348 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SAC51_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
242.0 | [0..1] | [320..1] |
|
Region A: Residues: [1-256] |
1 11 21 31 41 51
| | | | | |
1 MPLDKRQRDL PLGLSPQACF KDIVGRSVLP RIPLPELGKL YAAKLQARCL QPPPFQSLLC 60
61 SHDKESYGKR FSRSDMRSWC AAATTTTTPL GALESSQKRL LIFDQSGDQT RLLQCPFPLR 120
121 FPSHAAAEPV KLSELQGIEK AFKEDGEEFH KSDGTESEMH EDTEEINALL YSDDDYDDDC 180
181 ESDDEVMSTG HSPYPNEGVC NKRELEEIDG PCKRQKLLDK VNNISDLSSL VGTESSTQLN 240
241 GSSFLKDKKL PESKTI
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [257-348] |
1 11 21 31 41 51
| | | | | |
1 STKEDTGSGL SNEQSKKDKI RTALKILESV VPGAKGNEAL LLLDEAIDYL KLLKRDLIST 60
61 EVKNQSSTTH KSPILLLKET TWGTRNLQTD KA
|
| Detection Method: | |
| Confidence: | 15.045757 |
| Match: | 1am9A |
| Description: | SREBP-1a |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.12507195426228 | bayes_pls_golite062009 |
| nucleic acid binding | 0.43204604575196 | bayes_pls_golite062009 |
| DNA binding | 0.40884226851256 | bayes_pls_golite062009 |
| transcription regulator activity | 0.31759335140578 | bayes_pls_golite062009 |
| transcription factor activity | 0.09721565916723 | bayes_pls_golite062009 |
