| Protein: | PMK_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 505 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PMK_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
367.0 | [0..1] | [505..1] |
|
Region A: Residues: [1-505] |
1 11 21 31 41 51
| | | | | |
1 MAVVASAPGK VLMTGGYLVL EKPNAGLVLS TNARFYAIVK PINEEVKPES WAWKWTDVKL 60
61 TSPQLSRESM YKLSLNHLTL QSVSASDSRN PFVEHAIQYA IAAAHLATEK DKESLHKLLL 120
121 QGLDITILGS NDFYSYRNQI ESAGLPLTPE SLGTLAPFAS ITFNAAESNG ANSKPEVAKT 180
181 GLGSSAAMTT AVVAALLHYL GVVDLSDPCK EGKFGCSDLD VIHMIAQTSH CLAQGKVGSG 240
241 FDVSCAVYGS QRYVRFSPEV LSFAQVAVTG LPLNEVIGTI LKGKWDNKRT EFSLPPLMNL 300
301 FLGEPGSGGS STPSMVGAVK KWQMSDPEKA RENWQNLSDA NLELETKLND LSKLAKDHWD 360
361 VYLRVIKSCS VLTSEKWVLH ATEPINEAII KELLEAREAM LRIRILMRQM GEAASVPIEP 420
421 ESQTQLLDST MSAEGVLLAG VPGAGGFDAI FAITLGDSGT KLTQAWSSHN VLALLVREDP 480
481 HGVCLESGDP RTTCITSGVS SIHLE
|
| Detection Method: |  |
| Confidence: | 43.39794 |
| Match: | 1kvkA |
| Description: | Mevalonate kinase |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| diphosphomevalonate decarboxylase activity | 2.34245588421319 | bayes_pls_golite062009 |
| catalytic activity | 0.836142537655721 | bayes_pls_golite062009 |
| carbohydrate kinase activity | 0.49664490095304 | bayes_pls_golite062009 |
| nucleic acid binding | 0.369771518688522 | bayes_pls_golite062009 |
| structural constituent of ribosome | 0.325699575011026 | bayes_pls_golite062009 |
| transcription regulator activity | 0.212099606954236 | bayes_pls_golite062009 |
| structural molecule activity | 2.19428886088058E-4 | bayes_pls_golite062009 |
