| Protein: | CER7_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 438 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CER7_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
313.0 | [0..12] | [407..310] |
|
Region A: Residues: [1-288] |
1 11 21 31 41 51
| | | | | |
1 MEGRLANMWR LTVNESKFVE TALQSELRVD GRGLYDYRKL TIKFGKEYGS SEVQLGQTHV 60
61 MGFVTAQLVQ PYKDRPNEGS LSIFTEFSPM ADPSFEPGRP GESAVELGRI IDRGLRESRA 120
121 VDTESLCVLA GKMVWSVRID LHILDNGGNL VDAANIAALA ALMTFRRPDC TVGGENGQEV 180
181 IIHPLEEREP LPLIIHHLPI AFTFGFFNKG NIVVMDPTYV EEAVMCGRMT VTVNANGDIC 240
241 AIQKPGEEGV NQSVILHCLR LASSRAAATT KIIREEVEAY NCERSLQK
|
| Detection Method: |  |
| Confidence: | 64.045757 |
| Match: | 2nn6A |
| Description: | No description for 2nn6A was found. |
| Term | Confidence | Notes |
| exoribonuclease activity | 7.55877202113513 | bayes_pls_golite062009 |
| ribonuclease activity | 7.54644729272203 | bayes_pls_golite062009 |
| exoribonuclease activity, producing 5'-phosphomonoesters | 7.5310318714913 | bayes_pls_golite062009 |
| 3'-5'-exoribonuclease activity | 6.46930372693262 | bayes_pls_golite062009 |
| 3'-5' exonuclease activity | 4.29895100594643 | bayes_pls_golite062009 |
| exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters | 3.83939403332553 | bayes_pls_golite062009 |
| exonuclease activity | 3.40686901061667 | bayes_pls_golite062009 |
| hydrolase activity, acting on ester bonds | 2.86434572018929 | bayes_pls_golite062009 |
| RNA binding | 2.05527376734941 | bayes_pls_golite062009 |
| structural constituent of ribosome | 1.90115575554186 | bayes_pls_golite062009 |
| structural molecule activity | 1.69321127364043 | bayes_pls_golite062009 |
| hydrolase activity | 1.55476709794855 | bayes_pls_golite062009 |
| transcription regulator activity | 1.20748032530392 | bayes_pls_golite062009 |
| mRNA binding | 1.17402119891853 | bayes_pls_golite062009 |
| nucleic acid binding | 1.05662964529454 | bayes_pls_golite062009 |
| binding | 0.907487229190259 | bayes_pls_golite062009 |
| catalytic activity | 0.878454819018611 | bayes_pls_golite062009 |
| DNA binding | 0.828609700556836 | bayes_pls_golite062009 |
| nuclease activity | 0.69721312877891 | bayes_pls_golite062009 |
| carbohydrate kinase activity | 0.51810239718467 | bayes_pls_golite062009 |
| tRNA-specific ribonuclease activity | 0.383567539949931 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 0.0287026367466632 | bayes_pls_golite062009 |
|
Region A: Residues: [289-438] |
1 11 21 31 41 51
| | | | | |
1 VKRHPTLAKS EVSGPTVAVK EEHRKSSDQE RAAEISREHV ERLKLSTEEV RSSKEEEAAN 60
61 FKGGPSNWDP YSEAMDVDSL KVSLASRGDP VTKSSSTKKM NGSGNAQKVG VEISVEEVTG 120
121 ELGKKDTKHK DGEMTLKDAV KPKKKRKNKS
|
| Detection Method: | |
| Confidence: | 9.09691 |
| Match: | 1whuA |
| Description: | Solution structure of the alpha-helical domain from mouse hypothetical PNPase |
Matching Structure (courtesy of the PDB): |
|
