| Protein: | Y5410_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 614 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Y5410_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
351.0 | [0..6] | [610..138] |
|
Region A: Residues: [1-283] |
1 11 21 31 41 51
| | | | | |
1 MSRGRSFIFY FVLFLFFGSS ALYSQVTGDL AGDRQALLDF LNNIIHPRSL AWNTSSPVCT 60
61 TWPGVTCDID GTRVTALHLP GASLLGVIPP GTISRLSELQ ILSLRSNGLR GPFPIDFLQL 120
121 KKLKAISLGN NRFSGPLPSD YATWTNLTVL DLYSNRFNGS IPAGFANLTG LVSLNLAKNS 180
181 FSGEIPDLNL PGLRRLNFSN NNLTGSIPNS LKRFGNSAFS GNNLVFENAP PPAVVSFKEQ 240
241 KKNGIYISEP AILGIAISVC FVIFFVIAVV IIVCYVKRQR KSE
|
| Detection Method: |  |
| Confidence: | 12.522879 |
| Match: | 1ogqA |
| Description: | Polygalacturonase inhibiting protein PGIP |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| receptor activity | 3.26307298864411 | bayes_pls_golite062009 |
| transmembrane receptor activity | 3.15814977487775 | bayes_pls_golite062009 |
| molecular transducer activity | 2.54176035045352 | bayes_pls_golite062009 |
| signal transducer activity | 2.54176035045352 | bayes_pls_golite062009 |
| G-protein coupled receptor activity | 2.38174370875276 | bayes_pls_golite062009 |
| protein kinase activity | 1.61450095469422 | bayes_pls_golite062009 |
| transmembrane receptor protein kinase activity | 1.50579173120225 | bayes_pls_golite062009 |
| transmembrane receptor protein tyrosine kinase activity | 1.36671598599873 | bayes_pls_golite062009 |
| phosphotransferase activity, alcohol group as acceptor | 1.36168522830563 | bayes_pls_golite062009 |
| kinase activity | 1.28067810202729 | bayes_pls_golite062009 |
| binding | 1.23313855731605 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 0.875083054478353 | bayes_pls_golite062009 |
| protein binding | 0.646159692466759 | bayes_pls_golite062009 |
| receptor binding | 0.596307412859703 | bayes_pls_golite062009 |
| transferase activity | 0.435331931559158 | bayes_pls_golite062009 |
| epidermal growth factor receptor binding | 0.430075899423884 | bayes_pls_golite062009 |
| protein-hormone receptor activity | 0.42902267001067 | bayes_pls_golite062009 |
| protein tyrosine kinase activity | 0.231213253402712 | bayes_pls_golite062009 |
| growth factor binding | 0.0358215683345522 | bayes_pls_golite062009 |
|
Region A: Residues: [284-614] |
1 11 21 31 41 51
| | | | | |
1 TEPKPDKLKL AKKMPSEKEV SKLGKEKNIE DMEDKSEINK VMFFEGSNLA FNLEDLLIAS 60
61 AEFLGKGVFG MTYKAVLEDS KVIAVKRLKD IVVSRKDFKH QMEIVGNIKH ENVAPLRAYV 120
121 CSKEEKLMVY DYDSNGSLSL RLHGKNADEG HVPLNWETRL RFMIGVAKGL GHIHTQNLAH 180
181 GNIKSSNVFM NSEGYGCISE AGLPLLTNPV VRADSSARSV LRYRAPEVTD TRRSTPESDI 240
241 YSFGILMLET LTGRSIMDDR KEGIDLVVWV NDVISKQWTG EVFDLELVKT PNVEAKLLQM 300
301 LQLGTSCTAM VPAKRPDMVK VVETLEEIER D
|
| Detection Method: | |
| Confidence: | 67.39794 |
| Match: | 2qkwB |
| Description: | No description for 2qkwB was found. |
