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View Structure Prediction Details

Protein: LAC7_ARATH
Organism: Arabidopsis thaliana
Length: 567 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for LAC7_ARATH.

Description E-value Query
Range		 Subject
Range
LAC12_ARATH - Laccase-12 OS=Arabidopsis thaliana GN=LAC12 PE=2 SV=1
 452.0 [0..6] [567..7]

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Predicted Domain #1
Region A:
Residues: [1-567] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEGVRVPIAC ALILLAISSI TSASIVEHTF NVQNLTVSRL CKRQVITVVN GSLPGPTIRV  60
   61 KEGDSLVIHV LNHSPHNITI HWHGIFHKLT VWADGPSMIT QCPIQPGQRY AYRFNITGQE 120
  121 GTLWWHAHAS FLRATVYGAL VIRPKSGHSY PFPKPHKEVP ILFGEWWNTD VVALEEAAIA 180
  181 TGVPPNNSDA YTINGRPGNL YPCSKDRMFS LNVVKGKRYL LRIINAAMNI QLFFKIANHR 240
  241 LTVVAADAVY TAPYVTDVIV IAPGQTIDAL LFADQSVDTS YYMAAHPYAS APAVPFPNTT 300
  301 TRGVIHYGGA SKTGRSKPVL MPKLPSFFDT LTAYRFYSNL TALVNGPHWV PVPRYVDEEM 360
  361 LVTIGLGLEA CADNTTCPKF SASMSNHSFV LPKKLSILEA VFHDVKGIFT ADFPDQPPVK 420
  421 FDYTNPNVTQ TNPGLLFTQK STSAKILKFN TTVEVVLQNH ALIAAESHPM HLHGFNFHVL 480
  481 AQGFGNYDPS RDRSKLNLVD PQSRNTLAVP VGGWAVIRFT ANNPGAWIFH CHIDVHLPFG 540
  541 LGMIFVVKNG PTKSTTLPPP PPDLPKC

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 96.69897
Match: 1aozA
Description: Ascorbate oxidase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
ferroxidase activity 7.63571778010552 bayes_pls_golite062009
oxidoreductase activity, oxidizing metal ions, oxygen as acceptor 7.63571778010552 bayes_pls_golite062009
oxidoreductase activity, oxidizing metal ions 6.65192723037124 bayes_pls_golite062009
hydrogen ion transmembrane transporter activity 6.31879033933655 bayes_pls_golite062009
cation transmembrane transporter activity 5.08231506697861 bayes_pls_golite062009
ion transmembrane transporter activity 4.97613096658411 bayes_pls_golite062009
inorganic cation transmembrane transporter activity 4.59563513647911 bayes_pls_golite062009
substrate-specific transmembrane transporter activity 4.5497559272853 bayes_pls_golite062009
monovalent inorganic cation transmembrane transporter activity 3.81325448081642 bayes_pls_golite062009
metal ion transmembrane transporter activity 3.07382952844477 bayes_pls_golite062009
transition metal ion transmembrane transporter activity 2.9428517783106 bayes_pls_golite062009
transporter activity 2.75690053147562 bayes_pls_golite062009
substrate-specific transporter activity 2.68353223516483 bayes_pls_golite062009
transmembrane transporter activity 2.67027550825653 bayes_pls_golite062009
di-, tri-valent inorganic cation transmembrane transporter activity 1.88441243755534 bayes_pls_golite062009
iron ion transmembrane transporter activity 1.17954317549442 bayes_pls_golite062009
copper ion transmembrane transporter activity 0.96418286916503 bayes_pls_golite062009
binding 0.937962890255631 bayes_pls_golite062009
copper ion binding 0.86058748614439 bayes_pls_golite062009
catalytic activity 0.363071622766357 bayes_pls_golite062009
active transmembrane transporter activity 0.269767937058687 bayes_pls_golite062009
primary active transmembrane transporter activity 0.246123492452788 bayes_pls_golite062009
protein binding 0.19183671060378 bayes_pls_golite062009
cation binding 0.131613297938429 bayes_pls_golite062009
metal ion binding 0.131613297938429 bayes_pls_golite062009
ion binding 0.12994984918351 bayes_pls_golite062009
transition metal ion binding 0.075094300881557 bayes_pls_golite062009
receptor binding 0.0601969032951899 bayes_pls_golite062009
signal transducer activity 0.049534674746601 bayes_pls_golite062009
molecular transducer activity 0.049534674746601 bayes_pls_golite062009
YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle