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View Structure Prediction Details

Protein: SCP41_ARATH
Organism: Arabidopsis thaliana
Length: 469 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SCP41_ARATH.

Description E-value Query
Range
Subject
Range
SCP44_ARATH - Serine carboxypeptidase-like 44 OS=Arabidopsis thaliana GN=SCPL44 PE=2 SV=1
523.0 [0..19] [469..28]

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Predicted Domain #1
Region A:
Residues: [1-469]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAIVSLRDVA MVMVTVQVFA RGYPETDLVV RLPGQPKVVF RQYAGYVDLD LNAGRSLFYY  60
   61 FVEAEKHPDT KPLTLWLNGG PGCSSVGGGA FTELGPFYPT GYGRGLRINS MSWNKASNLL 120
  121 FVDSPAGVGW SYSNRSSDYN AGDKSAASDM LVFLLRWFDK FPELKSHDLF LTGESYAGHY 180
  181 IPQLADAILS YNSRSSGFKF NIKGIAIGNP LLKLDRDIPA VYEFFWSHGM ISEVVGRTIK 240
  241 IQCDFSHYTY AYPHNVSDAC NDAIREAGDI TTEYVNTFDV LPDLCYPSIA LQELRLKQMA 300
  301 TKMSMGVDVC MNYERQFYLN IPEVQMALHA NRTNLPYSWS LCSNLLNYSA IDVNTNMLPT 360
  361 LKRIIQNKIP VRIFSGDQDS VVPFLGTRTI VGELANDLNF KTTVPYGVWF HKRQVGGWAI 420
  421 EYGNLLTFAT VRGAAHAVAY TQPSRALHLF STFLRGQRLP NKTDIAMHD

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 112.0
Match: 1ivyA
Description: Human 'protective protein', HPP
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
hydrolase activity 4.09944423676394 bayes_pls_golite062009
peptidase activity 2.49064988313037 bayes_pls_golite062009
peptidase activity, acting on L-amino acid peptides 2.10044305272656 bayes_pls_golite062009
catalytic activity 1.39629727416851 bayes_pls_golite062009
palmitoyl-(protein) hydrolase activity 1.3250951453762 bayes_pls_golite062009
endopeptidase activity 0.43631945855397 bayes_pls_golite062009
hydrolase activity, acting on ester bonds 0.264183693934251 bayes_pls_golite062009
thiolester hydrolase activity 0.22327746138619 bayes_pls_golite062009
palmitoyl-CoA hydrolase activity 0.1174692258176 bayes_pls_golite062009
binding 0.112743564301567 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle