| Protein: | HMGYA_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 204 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for HMGYA_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
123.0 | [0..1] | [204..1] |
|
Region A: Residues: [1-97] |
1 11 21 31 41 51
| | | | | |
1 MAFDLHHGSA SDTHSSELPS FSLPPYPQMI MEAIESLNDK NGCNKTTIAK HIESTQQTLP 60
61 PSHMTLLSYH LNQMKKTGQL IMVKNNYMKP DPDAPPK
|
| Detection Method: |  |
| Confidence: | 12.522879 |
| Match: | 1hstA |
| Description: | Histone H5, globular domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.835523092977445 | bayes_pls_golite062009 |
| transcription regulator activity | 0.4843036104266 | bayes_pls_golite062009 |
| nucleic acid binding | 0.37117756729668 | bayes_pls_golite062009 |
| DNA binding | 0.3118855114645 | bayes_pls_golite062009 |
|
Region A: Residues: [98-204] |
1 11 21 31 41 51
| | | | | |
1 RGRGRPPKQK TQAESDAAAA AVVAATVVST DPPRSRGRPP KPKDPSEPPQ EKVITGSGRP 60
61 RGRPPKRPRT DSETVAAPEP AAQATGERRG RGRPPKVKPT VVAPVGC
|
| Detection Method: | |
| Confidence: | 1.36 |
| Match: | 1nw3A |
| Description: | Catalytic, N-terminal domain of histone methyltransferase Dot1l |
Matching Structure (courtesy of the PDB): |
|
