| Protein: | gi|6503305, gi|2... |
| Organism: | Arabidopsis thaliana |
| Length: | 900 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|6503305, gi|2....
| Description | E-value | Query Range |
Subject Range |
|
|
549.0 | [0..284] | [859..4] |
|
|
541.0 | [0..270] | [899..49] |
|
|
529.0 | [0..278] | [856..55] |
|
|
521.0 | [0..280] | [856..89] |
|
|
516.0 | [0..210] | [860..9] |
|
|
510.0 | [0..268] | [869..50] |
|
|
505.0 | [0..256] | [864..17] |
|
|
504.0 | [0..3] | [871..61] |
|
Region A: Residues: [1-197] |
1 11 21 31 41 51
| | | | | |
1 MGRHGSSSDE EERVRRRDRR RRERSPDVRR SRTETDDVAR RVRVSDDEDR KSSRRDLEIG 60
61 GTVADGEGRR GDKVRRKETS DDEELARRSR KDRKEANSGS EDDRGKRIEV DSDGDGERRV 120
121 NKGRNTDRVR ADTSSDEEDD LKGNKKEPME VDDDYGRRGR RRSPKVMEKQ GRERSHRGSR 180
181 VIADKPSDEE DDRQRSR
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [198-328] |
1 11 21 31 41 51
| | | | | |
1 GGRRESQRKR RDHRASDDDE EGEIRSERRG KEKNDRGSEG LLKRDRRERD LTDGHENGSR 60
61 RRESERKDRS RRDDGVRDEK ERRHNDKYDD SQRDKLRKED SRKREEKKIE VPKPKLAELN 120
121 PSENNAMALG K
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [329-567] |
1 11 21 31 41 51
| | | | | |
1 TGGVYIPPFK LARMMKEVED KSSVEYQRLT WDALRKSING LVNKVNASNI KNIIPELFAE 60
61 NLIRGRGLFC RSCMKSQMAS PGFTDVFAAL VAVINAKFPE VAELLLKRVV LQLKRAYKRN 120
121 DKPQLLAAVK FIAHLVNQQV AEEIIALELV TILLGDPTDD SVEVAVGFVT ECGAMLQDVS 180
181 PRGLNGIFER FRGILHEGEI DKRVQYLIES LFATRKAKFQ GHPAVRPELD LVEEKYSHD
|
| Detection Method: | |
| Confidence: | 30.69897 |
| Match: | 1hu3A |
| Description: | Eukaryotic initiation factor eIF4G |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [568-673] |
1 11 21 31 41 51
| | | | | |
1 LSLDHEIDPE TALDIFKPDP DFVENEKKYE ALKKELLGDE ESEDEDGSDA SSEDNDEEED 60
61 ESDEEDEEQM RIRDETETNL VNLRRTIYLT IMSSVDFEEA GHKLLK
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [674-900] |
1 11 21 31 41 51
| | | | | |
1 IKLEPGQEME LCIMLLECCS QERTYLRYYG LLGQRFCMIN KIHQENFEKC FVQQYSMIHR 60
61 LETNKLRNVA KFFAHLLGTD ALPWHVLAYI RLTEEDTTSS SRIFIKILFQ ELSEHLGIRL 120
121 LNERLQDPTM QESLESIFPK DNPKNTRFAI NFFTSIGLGG ITENLREYLK NMPSLIMQRQ 180
181 KQVAESESGS SSGSDSSDSE SESESGSSSS SSSDESDREK RKRRRRS
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
