| Protein: | gi|25411525, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 661 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|25411525, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
555.0 | [0..1] | [658..1] |
|
Region A: Residues: [1-112] |
1 11 21 31 41 51
| | | | | |
1 MNSNPVGVFR EREIDGKPFH IYTLSSQTDT TIPSSSGETA IDGDDHLSLQ QPLFLCPSLR 60
61 LRVHEENNSY TEFLPYKTSP HFPSIGSVDQ QVQHLLDSDS QQVHDLLHSD SS
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.258 | b.1.4 | beta-Galactosidase/glucuronidase domain |
| View | Download | 0.244 | d.54.1 | Enolase N-terminal domain-like |
| View | Download | 0.216 | b.1.1 | Immunoglobulin |
| View | Download | 0.215 | c.55.1 | Actin-like ATPase domain |
| View | Download | 0.211 | b.1.1 | Immunoglobulin |
|
Region A: Residues: [113-179] |
1 11 21 31 41 51
| | | | | |
1 HDDDDDDDVI CKLPVVPIYW CNSKELDYDQ FNCGACERSK IGTNYYVCLT CDLMFHKECV 60
61 ESPLEIK
|
| Detection Method: | |
| Confidence: | 2.32 |
| Match: | 1v5nA |
| Description: | Solution Structure of DC1 Domain of PDI-like Hypothetical Protein from Arabidopsis thaliana |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [180-249] |
1 11 21 31 41 51
| | | | | |
1 HPSYPFLSLK LYNRPGHRVS CMCCDLALCS MLYHCPTYKL SMHPVCAMKP IPIFIDHSKR 60
61 HPHLLTFFPK
|
| Detection Method: | |
| Confidence: | 3.69897 |
| Match: | 1tbnA |
| Description: | NMR STRUCTURE OF A PROTEIN KINASE C-G PHORBOL-BINDING DOMAIN, MINIMIZED AVERAGE STRUCTURE |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [250-360] |
1 11 21 31 41 51
| | | | | |
1 QASLLCDVCG LVKESFPTYV CVRCIFVVHR DCIYFPFVIK ICRHHHRISF TSSLPSGKWS 60
61 CGVCRQKVDN NCGAYTCNKC NHYFVHTRCA LREDVWDGKD LEGVPEEPEI I
|
| Detection Method: | |
| Confidence: | 2.12 |
| Match: | 1v5nA |
| Description: | Solution Structure of DC1 Domain of PDI-like Hypothetical Protein from Arabidopsis thaliana |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [361-423] |
1 11 21 31 41 51
| | | | | |
1 LEPFETIADG IILHFSHGHH LTLEISRVYD ENKFCQACIL PIYEGNYYSC MDDCDFILHE 60
61 ACA
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.721 | b.173.1 | Description not found. |
| View | Download | 0.548 | b.40.4 | Nucleic acid-binding proteins |
| View | Download | 0.491 | d.348.1 | Description not found. |
| View | Download | 0.484 | d.9.1 | Interleukin 8-like chemokines |
| View | Download | 0.482 | a.156.1 | S13-like H2TH domain |
| View | Download | 0.460 | d.348.1 | Description not found. |
| View | Download | 0.441 | a.55.1 | IHF-like DNA-binding proteins |
| View | Download | 0.390 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.348 | a.156.1 | S13-like H2TH domain |
|
Region A: Residues: [424-562] |
1 11 21 31 41 51
| | | | | |
1 NASRKKHHAL HGHPLTLKIV PGEQEYYKDY FQCSACYRQS CGYVYEAGYY RIDLRCASVS 60
61 EPFQYQGHEH PLFLALDRQQ ELEATCQICQ QKATFLRKLN CIECDYVICF KCATLPYEAK 120
121 YKHDKHFLTF REGKEESDQ
|
| Detection Method: | |
| Confidence: | 4.30103 |
| Match: | 2ysmA |
| Description: | No description for 2ysmA was found. |
|
Region A: Residues: [563-661] |
1 11 21 31 41 51
| | | | | |
1 LDWCEVCEKR IVYSRKDGFY ACDHCCTTLH VHCLLGEDMY MLKPSQTITY IKREVHILPN 60
61 NTRSRPFCHH HDEDRCPHKV VFKWQDQYTI FCSYRCLTK
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.450 | b.43.4 | Riboflavin synthase domain-like |
| View | Download | 0.450 | b.43.4 | Riboflavin synthase domain-like |
| View | Download | 0.426 | b.61.8 | Description not found. |
| View | Download | 0.410 | b.40.4 | Nucleic acid-binding proteins |
| View | Download | 0.405 | b.43.4 | Riboflavin synthase domain-like |
| View | Download | 0.405 | b.43.4 | Riboflavin synthase domain-like |
| View | Download | 0.404 | b.15.1 | HSP20-like chaperones |
| View | Download | 0.379 | b.61.3 | D-aminopeptidase, middle and C-terminal domains |
| View | Download | 0.379 | b.61.3 | D-aminopeptidase, middle and C-terminal domains |
| View | Download | 0.303 | d.15.5 | Staphylokinase/streptokinase |
