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Protein Overview: gi|25411525, gi|...

General Information:
Name(s) found: gi|60547703 [NCBI NR]
gi|29725844 [NCBI NR]
gi|25411525 [NCBI NR]
gi|20197610 [NCBI NR]
gi|15225531 [NCBI NR]
Description(s) found:
Found 15 descriptions.
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  • gi|60547703|gb|AAX23815.1| hypothetical protein At2g13900 [Arabidopsis thaliana] [NCBI NR]
  • gi|29725844|gb|AAO89210.1| hypothetical protein [Arabidopsis thaliana] [NCBI NR]
  • pir||G84511 hypothetical protein At2g13900 [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|20197610|gb|AAM15153.1| hypothetical protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15225531|ref|NP_179007.1| DC1 domain-containing protein [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 661 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: zinc ion binding [IEA]
    protein binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNSNPVGVFR EREIDGKPFH IYTLSSQTDT TIPSSSGETA IDGDDHLSLQ QPLFLCPSLR  60
   61 LRVHEENNSY TEFLPYKTSP HFPSIGSVDQ QVQHLLDSDS QQVHDLLHSD SSHDDDDDDD 120
  121 VICKLPVVPI YWCNSKELDY DQFNCGACER SKIGTNYYVC LTCDLMFHKE CVESPLEIKH 180
  181 PSYPFLSLKL YNRPGHRVSC MCCDLALCSM LYHCPTYKLS MHPVCAMKPI PIFIDHSKRH 240
  241 PHLLTFFPKQ ASLLCDVCGL VKESFPTYVC VRCIFVVHRD CIYFPFVIKI CRHHHRISFT 300
  301 SSLPSGKWSC GVCRQKVDNN CGAYTCNKCN HYFVHTRCAL REDVWDGKDL EGVPEEPEII 360
  361 LEPFETIADG IILHFSHGHH LTLEISRVYD ENKFCQACIL PIYEGNYYSC MDDCDFILHE 420
  421 ACANASRKKH HALHGHPLTL KIVPGEQEYY KDYFQCSACY RQSCGYVYEA GYYRIDLRCA 480
  481 SVSEPFQYQG HEHPLFLALD RQQELEATCQ ICQQKATFLR KLNCIECDYV ICFKCATLPY 540
  541 EAKYKHDKHF LTFREGKEES DQLDWCEVCE KRIVYSRKDG FYACDHCCTT LHVHCLLGED 600
  601 MYMLKPSQTI TYIKREVHIL PNNTRSRPFC HHHDEDRCPH KVVFKWQDQY TIFCSYRCLT 660
  661 K

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..112] deduced N/A No confident structure predictions are available.
    2 View Details [113..179] FFAS03 2.32 Solution Structure of DC1 Domain of PDI-like Hypothetical Protein from Arabidopsis thaliana
    3 View Details [180..249] PSI-BLAST 3.69897 NMR STRUCTURE OF A PROTEIN KINASE C-G PHORBOL-BINDING DOMAIN, MINIMIZED AVERAGE STRUCTURE
    4 View Details [250..360] FFAS03 2.12 Solution Structure of DC1 Domain of PDI-like Hypothetical Protein from Arabidopsis thaliana
    5 View Details [361..423] deduced N/A No confident structure predictions are available.
    6 View Details [424..562] PSI-BLAST 4.30103 No description for 2ysmA was found.
    7 View Details [563..661] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle