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Protein Overview: gi|11358098, gi|...

General Information:
Name(s) found: gi|7406429 [NCBI NR]
gi|15241756 [NCBI NR]
gi|11358098 [NCBI NR]
Description(s) found:
Found 11 descriptions.
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  • gi|7406429|emb|CAB85538.1| putative protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15241756|ref|NP_195853.1| DC1 domain-containing protein [Arabidopsis thaliana] [NCBI NR]
  • pir||T48254 hypothetical protein T1E22.90 - Arabidopsis thaliana [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 656 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: zinc ion binding [IEA]
    protein binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNSNSVGVFR EKEIDGKPFH TYTLSSQTDT TTPSSSGETA IDGDDHLSLQ QPLFLCPSLR  60
   61 LKADEINYSY SEILPFNISP YFPSIRGADQ QVQHLLDSDS QQVHDLLHSD NSHDDDGDEI 120
  121 CKLPVVPIYW CNSKEIEFDQ FNCGACERSK IGTDYYICLT CDLMFHKECV ESPLEIKHPS 180
  181 YPFLSLKLYT RHEQLMSCMC CKHPSNLIFY YCPTYKLSLH PDCAMKPISI FIDHPKRHPH 240
  241 LLTFFPKQAS LLCDVCSLIK EAFPTYVCLR CIFVAHRDCI YFPYVIKICR HQHRISFTSS 300
  301 LPSGKWSCGV CRKKVDNNCG AYTCNKCSHY FVHTRCALRE DLWDGKDLEG VPEEPEIILE 360
  361 PFETIADGII LHFSHGHHLK LKTSGVYNEN IICQACILPI YEGNYYSCMD QCNFILHEAC 420
  421 ANASRKKDHA LHSHPLTLKV VSDIQNEYFK GYFRCSACDR ESCGFIYEED QYSIDIRCAS 480
  481 VSEPFDYQGH EHPLFQALDR KEEREAICQI CRKKYGRKLN CIECNYIICF SCATLPYKAK 540
  541 YKLDKHFLTF REGEEGSDQL DWCEVCEKKL EYSREGGFYA CDDCCTTLHV DCLLGKEMYM 600
  601 LNPGHTVMAY RSNIYILPNN TMTRPFCQLH KEDRCPHKVI FNWHDMTFCS YSCSMD

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..98] deduced N/A No confident structure predictions are available.
    2 View Details [99..174] FFAS03 2.39 Solution Structure of DC1 Domain of PDI-like Hypothetical Protein from Arabidopsis thaliana
    3 View Details [175..245] PSI-BLAST 4.522879 NMR STRUCTURE OF A PROTEIN KINASE C-G PHORBOL-BINDING DOMAIN, MINIMIZED AVERAGE STRUCTURE
    4 View Details [246..450] MSA 1.230996 View MSA. No confident structure predictions are available.
    5 View Details [451..545] deduced N/A No confident structure predictions are available.
    6 View Details [546..656] PSI-BLAST 6.045757 Solution Structure of The C1 Domain of The Human Diacylglycerol Kinase Delta

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • binding
    		•  0.0196698141692984 bayes_pls_golite062009
    3
    Term Confidence Notes
  • binding
    		•  0.0980674097362609 bayes_pls_golite062009
    4 No functions predicted.
    5 No functions predicted.
    6
    Term Confidence Notes
  • binding
    		•  0.0980674097362609 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle