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View Structure Prediction Details

Protein: SCP51_ARATH
Organism: Arabidopsis thaliana
Length: 461 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SCP51_ARATH.

Description E-value Query
Range
Subject
Range
SCP34_ARATH - Serine carboxypeptidase-like 34 OS=Arabidopsis thaliana GN=SCPL34 PE=2 SV=2
465.0 [0..14] [461..44]

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Predicted Domain #1
Region A:
Residues: [1-461]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKTTVVYLVI LCLIVSCTNG ETKHVRKINS DGSEAWGYVE VRPKAHMFWW HYKSPYRVEN  60
   61 PSKPWPIILW LQGGPGASGV GIGNFQEVGP LDTFLKPRNS TWLKKADLLF VDSPVGAGYS 120
  121 FVEGNQKDLY VKSDEEAAQD LTKLLQQLFN KNQTLNQSPL FIVAESYGGK IAVKLGLSVI 180
  181 DAVQSGKLKL HLGGVILGDS WISPEDFVFS WGPLLKHVSR LDDNGLDSSN SLAEKIKTQI 240
  241 KNGEYVGATQ TWMDLENLIS SKSNFVDFYN FLLDTGMDPV SLTTSLKIKK EEKIKKYSRY 300
  301 LNDMRSLSDV EDVEGDLDKL MNGVIKKKLK IIPNDLIWGN NSDDVFTAME AAFMKPVIED 360
  361 VDELLATGVD VTIYNGQLDV ICSTSGTEAW VHKLRWEGLE EFKKMEREPL FCESDRATRG 420
  421 FTKSYKNLHF YWILGAGHFV PVDEPCVALK MVGEITKSPQ L

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 111.0
Match: 1ivyA
Description: Human 'protective protein', HPP
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
hydrolase activity 4.09944423676394 bayes_pls_golite062009
peptidase activity 2.49064988313037 bayes_pls_golite062009
peptidase activity, acting on L-amino acid peptides 2.10044305272656 bayes_pls_golite062009
catalytic activity 1.39629727416851 bayes_pls_golite062009
palmitoyl-(protein) hydrolase activity 1.3250951453762 bayes_pls_golite062009
palmitoyl-CoA hydrolase activity 0.815337671271829 bayes_pls_golite062009
binding 0.780364496307855 bayes_pls_golite062009
hydrolase activity, acting on ester bonds 0.541803897301601 bayes_pls_golite062009
endopeptidase activity 0.43631945855397 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle