| Protein: | GPDL6_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 753 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GPDL6_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
531.0 | [0..1] | [749..1] |
|
Region A: Residues: [1-334] |
1 11 21 31 41 51
| | | | | |
1 MLRFFILFSL FLHSSVAAPK TPAAAAAVPA KKWLTLNGQE PAVVARGGFS GLFPESSISA 60
61 NDLAIGTSSP GFTMLCNLQM TKDGVGLCLS DIRLDNATTI SSVFPKAQKT YKVNGQDLKG 120
121 WFVIDYDADT IFNKVTLVQN IFSRPSIFDG QMSVSAVEDV LGTKPPKFWL SVQYDAFYME 180
181 HKLSPAEYLR SLRFRGINVI SSPEIGFLKS IGMDAGRAKT KLIFEFKDPE AVEPTTNKKY 240
241 SEIQQNLAAI KAFASGVLVP KDYIWPIDSA KYLKPATTFV ADAHKAGLEV YASGFANDLR 300
301 TSFNYSYDPS AEYLQFVDNG QFSVDGVITD FPPT
|
| Detection Method: |  |
| Confidence: | 7.43 |
| Match: | 1ydyA |
| Description: | Crystal structure of periplasmic glycerophosphodiester phosphodiesterase from Escherichia coli |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| glycerophosphodiester phosphodiesterase activity | 3.68445321741946 | bayes_pls_golite062009 |
| phosphoric diester hydrolase activity | 2.87623941757347 | bayes_pls_golite062009 |
| phospholipase activity | 2.34256284862049 | bayes_pls_golite062009 |
| phosphoric ester hydrolase activity | 2.16637986205099 | bayes_pls_golite062009 |
| phospholipase C activity | 1.73529903991246 | bayes_pls_golite062009 |
| catalytic activity | 1.51309614844421 | bayes_pls_golite062009 |
| hydrolase activity | 1.11363086413582 | bayes_pls_golite062009 |
| inositol or phosphatidylinositol phosphodiesterase activity | 1.0337343980667 | bayes_pls_golite062009 |
| phosphoinositide phospholipase C activity | 1.0337343980667 | bayes_pls_golite062009 |
| hydrolase activity, acting on ester bonds | 0.708240790319993 | bayes_pls_golite062009 |
| lipase activity | 0.523560911441767 | bayes_pls_golite062009 |
|
Region A: Residues: [335-662] |
1 11 21 31 41 51
| | | | | |
1 ASQSITCFSH QNGNLPKAGH ALVITHNGAS GDYPGCTDLA YQKAIDDGAD IIDCSVQMSK 60
61 DGIAFCHDAA DLSASTTART TFMSRATSVP EIQPTNGIFS FDLTWAEIQS VKPQIENPFT 120
121 ATGFQRNPAN KNAGKFTTLA DFLELGKAKA VTGVLINIQN AAYLASKKGL GVVDVVKSAL 180
181 TNSTLDKQST QKVLIQSDDS SVLSSFEAVP PYTRVLSIDK EIGDAPKTSI EEIKKHADAV 240
241 NLLRTSLITV SQSFATGKTN VVEEMHKANI SVYVSVLRNE YIAIAFDYFS DPTIELATFI 300
301 AGRGVDGVIT EFPATATRYL RSPCSDLN
|
| Detection Method: | |
| Confidence: | 62.0 |
| Match: | 1ydyA |
| Description: | Crystal structure of periplasmic glycerophosphodiester phosphodiesterase from Escherichia coli |
| Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| glycerophosphodiester phosphodiesterase activity | 4.35763630438153 | bayes_pls_golite062009 |
| phosphoric diester hydrolase activity | 3.47412784753044 | bayes_pls_golite062009 |
| phospholipase activity | 2.8321699398643 | bayes_pls_golite062009 |
| phosphoric ester hydrolase activity | 2.57532322042891 | bayes_pls_golite062009 |
| phospholipase C activity | 2.32904713147591 | bayes_pls_golite062009 |
| inositol or phosphatidylinositol phosphodiesterase activity | 1.61821062008614 | bayes_pls_golite062009 |
| phosphoinositide phospholipase C activity | 1.61821062008614 | bayes_pls_golite062009 |
| catalytic activity | 1.5937209337624 | bayes_pls_golite062009 |
| hydrolase activity | 1.29995031555289 | bayes_pls_golite062009 |
| hydrolase activity, acting on ester bonds | 1.04192252786893 | bayes_pls_golite062009 |
| lipase activity | 0.9683458467556 | bayes_pls_golite062009 |
|
Region A: Residues: [663-753] |
1 11 21 31 41 51
| | | | | |
1 KDQPYAILPA DAGALLTVAD KEAQLPAIPP NPPLDAKDVI DPPLPPVAKL ASNGTEGGPP 60
61 QTPPRSGTVA IAANLSLSLL AMMALGLLYT A
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
