| Protein: | Y5780_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 559 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Y5780_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
521.0 | [0..2] | [545..3] |
|
|
516.0 | [0..1] | [557..1] |
|
|
498.0 | [0..1] | [557..1] |
|
|
496.0 | [0..20] | [557..65] |
|
|
484.0 | [0..1] | [558..1] |
|
Region A: Residues: [1-156] |
1 11 21 31 41 51
| | | | | |
1 MKFMKIGTKP DTFYTQEASR ILITDTPNDL VIRINNTTYH LHRSCLVPKC GLLRRLCTDL 60
61 EESDTVTIEL NDIPGGADAF ELCAKFCYDI TINLSAHNLV NALCASKFLR MSDSVDKGNL 120
121 LPKLEAFFHS CILQGWKDSI VTLQSTTKLP EWCENL
|
| Detection Method: |  |
| Confidence: | 19.522879 |
| Match: | 2nn2A |
| Description: | No description for 2nn2A was found. |
|
Region A: Residues: [157-353] |
1 11 21 31 41 51
| | | | | |
1 GIVRKCIDSI VEKILTPTSE VSWSHTYTRP GYAKRQHHSV PRDWWTEDIS DLDLDLFRCV 60
61 ITAARSTFTL PPQLIGEALH VYTCRWLPYF KSNSHSGFSV KENEAALERH RRLVNTVVNM 120
121 IPADKGSVSE GFLLRLVSIA SYVRASLTTK TELIRKSSLQ LEEATLEDLL LPSHSSSHLH 180
181 RYDTDLVATV LESFLML
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [354-427] |
1 11 21 31 41 51
| | | | | |
1 WRRQSSAHLS SNNTQLLHSI RKVAKLIDSY LQAVAQDVHM PVSKFVSLSE AVPDIARQSH 60
61 DRLYKAINIF LKVH
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.862 | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.727 | a.7.17 | Description not found. |
| View | Download | 0.727 | a.7.17 | Description not found. |
| View | Download | 0.716 | a.7.17 | Description not found. |
| View | Download | 0.698 | a.7.17 | Description not found. |
| View | Download | 0.578 | a.51.1 | Cytochrome c oxidase subunit h |
| View | Download | 0.572 | a.2.8 | Eukaryotic DNA topoisomerase I, dispensable insert domain |
| View | Download | 0.534 | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.502 | f.17.1 | F1F0 ATP synthase subunit C |
| View | Download | 0.464 | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.343 | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.295 | a.37.1 | A DNA-binding domain in eukaryotic transcription factors |
| View | Download | 0.273 | a.163.1 | Crustacean CHH/MIH/GIH neurohormone |
| View | Download | 0.225 | d.52.1 | Alpha-lytic protease prodomain |
|
Region A: Residues: [428-559] |
1 11 21 31 41 51
| | | | | |
1 PEISKEEKKR LCRSLDCQKL SAQVRAHAVK NERMPLRTVV QALFFDQESG SKGASSRSES 60
61 QELFTRGKET PTDEHSMMHK LHLGPASTGK AKNVLEEGCK RGEEKTRSST DPKKIVWKGT 120
121 GSEHKHHISR DR
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.228 | N/A | N/A | a.74.1 | Cyclin-like |
| View | Download | 0.228 | N/A | N/A | a.74.1 | Cyclin-like |
| View | Download | 0.226 | N/A | N/A | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
