| Protein: | PPIL2_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 595 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PPIL2_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
584.0 | [0..1] | [595..1] |
|
|
513.0 | [0..1] | [595..1] |
|
|
506.0 | [0..1] | [595..1] |
|
|
504.0 | [0..1] | [595..1] |
|
|
494.0 | [0..1] | [567..1] |
|
|
489.0 | [0..1] | [556..1] |
|
Region A: Residues: [1-98] |
1 11 21 31 41 51
| | | | | |
1 MGKKQHSKDR MFITKTEWAT EWGGAKSKEN RTPFKSLPYY CCALTFLPFE DPVCTIDGSV 60
61 FEITTIVPYI RKFGKHPVTG APLKGEDLIP LIFHKNSE
|
| Detection Method: |  |
| Confidence: | 15.69897 |
| Match: | 2f42A |
| Description: | No description for 2f42A was found. |
|
Region A: Residues: [99-192] |
1 11 21 31 41 51
| | | | | |
1 GEYHCPVLNK VFTEFTHIVA VKTTGNVFCY EAIKELNIKT KNWKELLTEE PFTRADLITI 60
61 QNPNAVDGKV TVEFDHVKNG LKIDDEELKK MNSD
|
| Detection Method: | |
| Confidence: | 2.19 |
| Match: | 1e4uA |
| Description: | Not-4 N-terminal RING finger domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [193-339] |
1 11 21 31 41 51
| | | | | |
1 PAYNINVSGD IKHMLADLGT DKAKEIALHG GGGNKARNER AAAIAAILES RSKIKEVSKA 60
61 EQPKQTYSVV DAASASVFGR SADAAKAGSS DKTAARIAMH MAGDRTPVNS KMVKSRYSSG 120
121 AASRSFTSSA FTPVTKNDFE LIKVEKN
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.406 | a.24.3 | Cytochromes |
| View | Download | 0.398 | d.14.1 | Ribosomal protein S5 domain 2-like |
| View | Download | 0.303 | a.162.1 | Pre-protein croslinking domain of SecA |
| View | Download | 0.244 | a.79.1 | Antitermination factor NusB |
| View | Download | 0.220 | a.118.8 | TPR-like |
| View | Download | 0.220 | a.118.8 | TPR-like |
| View | Download | 0.209 | a.118.8 | TPR-like |
| View | Download | 0.201 | a.118.8 | TPR-like |
|
Region A: Residues: [340-499] |
1 11 21 31 41 51
| | | | | |
1 PKKKGYVQFQ TTHGDLNIEL HCDIAPRACE NFITLCERGY YNGVAFHRSI RNFMIQGGDP 60
61 TGTGKGGESI WGKPFKDEPN SKLLHSGRGV VSMANSGPHT NGSQFFVLYK SATHLNYKHT 120
121 VFGGVVGGLA TLAAMENVPV DESDRPLEEI KIIEASVFVN
|
| Detection Method: | |
| Confidence: | 55.69897 |
| Match: | 1zkcA |
| Description: | Crystal Structure of the cyclophiln_RING domain of human peptidylprolyl isomerase (cyclophilin)-like 2 isoform b |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [500-595] |
1 11 21 31 41 51
| | | | | |
1 PYTELDEEEE KEKAEKEKNE DKDIEKIGSW YSNPGSGTTE AGAGGGGVGK YLKAMSSTAT 60
61 KDTKGSLDSD ISTIGVSKKR KTTASASTGF KDFSSW
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.303 | a.29.16 | Description not found. |
| View | Download | 0.265 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.213 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.213 | a.4.5 | "Winged helix" DNA-binding domain |
