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View Structure Prediction Details

Protein: CORI3_ARATH
Organism: Arabidopsis thaliana
Length: 422 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CORI3_ARATH.

Description E-value Query
Range
Subject
Range
AAT1_BACSU - Aspartate aminotransferase OS=Bacillus subtilis GN=aspB PE=3 SV=1
AAT1_BACSU - Aspartate aminotransferase OS=Bacillus subtilis (strain 168) GN=aspB PE=3 SV=1
gi|221314475 - gi|221314475|ref|ZP_03596280.1| aspartate aminotransferase [Bacillus subtilis subsp. subtilis str. N...
gi|221319397 - gi|221319397|ref|ZP_03600691.1| aspartate aminotransferase [Bacillus subtilis subsp. subtilis str. J...
gi|221323673 - gi|221323673|ref|ZP_03604967.1| aspartate aminotransferase [Bacillus subtilis subsp. subtilis str. S...
348.0 [0..10] [409..3]

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Predicted Domain #1
Region A:
Residues: [1-422]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATLKCIDWQ FSGSEAAKDA AAASLGSYTS ALYALCDPHG KPILPPRNEI LETSNTAEKA  60
   61 VVKAVLYGSG NAYAPSLGLA AAKSAVAEYL NQGLPKKLTA DDVFMTLGCK QAIELAVDIL 120
  121 AKPKANVLLP SPGFPWDLVR SIYKNLEVRH YNFLPEKNFE IDFDSVRALV DENTFAIFII 180
  181 NPHNPNGNTY SEAHLKQLAE LAKELKIMVV SDEVFRWTLF GSNPFVPMGK FSSIVPVVTL 240
  241 GSISKGWKVP GWRTGWLTLH DLDGVFRNTK VLQAAQDFLQ INNNPPTVIQ AAIPDILEKT 300
  301 PQEFFDKRQS FLKDKVEFGY SKLKYIPSLT CYMKPEACTF LWTELDLSSF VDIEDDQDFC 360
  361 NKLAKEENLV VLPGIAFSQK NWLRHSIDME TPVLEDALER LKSFCDRHSN KKAPLKDVNG 420
  421 VK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 65.69897
Match: 1bw0A
Description: Tyrosine aminotransferase (TAT)
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
L-aspartate:2-oxoglutarate aminotransferase activity 5.51961002550688 bayes_pls_golite062009
catalytic activity 2.29878871754893 bayes_pls_golite062009
transferase activity, transferring nitrogenous groups 1.28316822767388 bayes_pls_golite062009
transaminase activity 1.24990480711889 bayes_pls_golite062009
transferase activity 0.737426388870721 bayes_pls_golite062009
5-aminolevulinate synthase activity 0.54326874956263 bayes_pls_golite062009
transferase activity, transferring acyl groups 0.319452731970428 bayes_pls_golite062009
glycine dehydrogenase (decarboxylating) activity 0.15024612852051 bayes_pls_golite062009
oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor 0.15024612852051 bayes_pls_golite062009
binding 0.107301373746935 bayes_pls_golite062009
aromatic-amino-acid:2-oxoglutarate aminotransferase activity 0.0916183433120769 bayes_pls_golite062009
cystathionine beta-lyase activity 0.0833010353195099 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle