| Protein: | gi|23506045, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 656 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|23506045, gi|....
| Description | E-value | Query Range |
Subject Range |
|
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493.0 | [0..6] | [655..2] |
|
|
491.0 | [0..6] | [655..2] |
|
|
464.0 | [0..1] | [652..1] |
|
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458.0 | [0..1] | [650..1] |
|
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441.0 | [0..1] | [651..1] |
|
Region A: Residues: [1-64] |
1 11 21 31 41 51
| | | | | |
1 MEFNKEEATR AREIAKRKFL ANDFAGARKF ALKAQFLYPE LDGIAQMVAT FDVHLSAQNI 60
61 IYGD
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.964 | N/A | N/A | a.7.17 | Description not found. |
|
Region A: Residues: [65-149] |
1 11 21 31 41 51
| | | | | |
1 VDHYGVLGLN PEADDEIVRK RYRKLAVMLH PDRNKSVGAE EAFKFLSQAW GVFSDKAKRA 60
61 DYDLKRNVGL YKGGGASSSR PATNG
|
| Detection Method: | |
| Confidence: | 19.0 |
| Match: | 1xblA |
| Description: | NMR STRUCTURE OF THE J-DOMAIN (RESIDUES 2-76) IN THE ESCHERICHIA COLI N-TERMINAL FRAGMENT (RESIDUES 2-108) OF THE MOLECULAR CHAPERONE DNAJ, 20 STRUCTURES |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [150-457] |
1 11 21 31 41 51
| | | | | |
1 FQKVTKASGN TTKVKSSKRG IKRASDASAA ATTSTSAQKT TADGTFWTVC RTCRTQYEYH 60
61 SVYLNQNLLC PNCRKPFIAV ETDPPGSGSI RKTFHEHQFD SLRHTTDGRK KNVPGRDNNG 120
121 VYGEYDSFEW GVFTGTKTSA HATPTGSRKD EVVRREYTKR TAGPSSTIPP KRRKVMENAV 180
181 AGGNIASCLA PKSTGVKEVS EDELKNLLKK KAKSVISRNL PELCTIVAET ETNGRGMETE 240
241 DLNGFNAGSS VNKNAIESCC MNTDKELNSL GALTLDVTAP DFCDFDKDRT EKSVKDNQIW 300
301 AFYDSHEG
|
| Detection Method: | |
| Confidence: | 19.39794 |
| Match: | 1nltA |
| Description: | The crystal structure of Hsp40 Ydj1 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [458-656] |
1 11 21 31 41 51
| | | | | |
1 LPRSYALIHN VISVDPFKVR MSWLTPVTNG EPSSTNWLGF GIPKSCGGFR VRKTLIYRSP 60
61 YSFSHKVNLV KGNHGEFLIY PRTGDVWALY RKWSPDWNYL TGVETVEYDI VEVVEGYTEE 120
121 YGVVVVPLVK VAGFKAVFHH HLDSKETKRF LRDEISRFSH KIPSYLLTGQ EAPGAPRGCR 180
181 QLDPAATPSQ LLQAIDDYR
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
