YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|50923857, gi|...

General Information:
Name(s) found: gi|50923857 [NCBI NR]
gi|38344577 [NCBI NR]
Description(s) found:
Found 4 descriptions.
SHOW ALL
  • gi|50923857|ref|XP_472289.1| OSJNBa0053B21.9 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|38344577|emb|CAE05535.2| OSJNBa0053B21.9 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
    • Organism: Oryza sativa Japonica Group
    Length: 729 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDEAIKARGV AESRFHSRDI RGARKYAIKA QNLCPSLEGI SQMVSTLEVH LAAESKIDGE  60
   61 SDWYRILSLT AFADEEEVKK QYRKLALQLH PDKNKSVGAE EAFKLISEAW SVLSDNSKKV 120
  121 LYDQKRKDHS VVNVTNGMYT YDKKANKRAR KNAAAAAAAA AAAAAAAEAT TRPAGVDTFW 180
  181 TSCNRCRMQY EYLRIYLNHN LLCPNCHHAF LAVETGFPCN GSSSSFSWST KQQPQNNNST 240
  241 KHSYGSTSRT SSIPGTGHGG YQQDGTYDSY NNQSFQWNQY SKTTPAAGTN AYGTQALEKP 300
  301 KRKHEESYSY NYSATGNSYG HERTNSRRGR FSKRRRHSND GYTTMDFGGD NRETVAASTE 360
  361 TTAFTDVAVA QVNGTSGEKL RSAVSGRRAN VLREISQIDT RALLIEKAKA AIQEKLQEWN 420
  421 ITSSSRLAER GKSQGKVYPS DNNIKQNGGL SDKHVKGLKQ CSSRSVDTQA PTVDEKNPEQ 480
  481 RRVPVSIDVP DPDFHDFDKD RTERAFDSDQ VWATYDSEDG MPRLYAMVQK VLSMRPFRIR 540
  541 MSFLNSKSNS ELAPISWVAS GFQKTCGDFR VGRYQISETV NIFSHKVSWT KGPRGIIRIV 600
  601 PQKGDTWALY RNWSPDWNEL TPDDVIYKYE IVEIIDDFTD EQGLTVIPLL KVAGFKAVFH 660
  661 RHMDPKEARR IPKEELFRFS HRVPSRLLTG EEGNNAPKGC HELDPAATPV DLLKVITEVT 720
  721 EDTATQPAK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..185] PSI-BLAST 19.221849 NMR STRUCTURE OF THE J-DOMAIN (RESIDUES 2-76) IN THE ESCHERICHIA COLI N-TERMINAL FRAGMENT (RESIDUES 2-108) OF THE MOLECULAR CHAPERONE DNAJ, 20 STRUCTURES
    2 View Details [186..368] PSI-BLAST 17.69897 The crystal structure of Hsp40 Ydj1
    3 View Details [369..489] deduced N/A No confident structure predictions are available.
    4 View Details [490..729] deduced N/A No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • binding
    		•  0.036672061154828 bayes_pls_golite062009
    3 No functions predicted.
    4 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.92

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle