| Protein: | gi|50923857, gi|... |
| Organism: | Oryza sativa Japonica Group |
| Length: | 729 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|50923857, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
662.0 | [0..1] | [729..1] |
|
Region A: Residues: [1-185] |
1 11 21 31 41 51
| | | | | |
1 MDEAIKARGV AESRFHSRDI RGARKYAIKA QNLCPSLEGI SQMVSTLEVH LAAESKIDGE 60
61 SDWYRILSLT AFADEEEVKK QYRKLALQLH PDKNKSVGAE EAFKLISEAW SVLSDNSKKV 120
121 LYDQKRKDHS VVNVTNGMYT YDKKANKRAR KNAAAAAAAA AAAAAAAEAT TRPAGVDTFW 180
181 TSCNR
|
| Detection Method: |  |
| Confidence: | 19.221849 |
| Match: | 1xblA |
| Description: | NMR STRUCTURE OF THE J-DOMAIN (RESIDUES 2-76) IN THE ESCHERICHIA COLI N-TERMINAL FRAGMENT (RESIDUES 2-108) OF THE MOLECULAR CHAPERONE DNAJ, 20 STRUCTURES |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [186-368] |
1 11 21 31 41 51
| | | | | |
1 CRMQYEYLRI YLNHNLLCPN CHHAFLAVET GFPCNGSSSS FSWSTKQQPQ NNNSTKHSYG 60
61 STSRTSSIPG TGHGGYQQDG TYDSYNNQSF QWNQYSKTTP AAGTNAYGTQ ALEKPKRKHE 120
121 ESYSYNYSAT GNSYGHERTN SRRGRFSKRR RHSNDGYTTM DFGGDNRETV AASTETTAFT 180
181 DVA
|
| Detection Method: | |
| Confidence: | 17.69897 |
| Match: | 1nltA |
| Description: | The crystal structure of Hsp40 Ydj1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.036672061154828 | bayes_pls_golite062009 |
|
Region A: Residues: [369-489] |
1 11 21 31 41 51
| | | | | |
1 VAQVNGTSGE KLRSAVSGRR ANVLREISQI DTRALLIEKA KAAIQEKLQE WNITSSSRLA 60
61 ERGKSQGKVY PSDNNIKQNG GLSDKHVKGL KQCSSRSVDT QAPTVDEKNP EQRRVPVSID 120
121 V
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [490-729] |
1 11 21 31 41 51
| | | | | |
1 PDPDFHDFDK DRTERAFDSD QVWATYDSED GMPRLYAMVQ KVLSMRPFRI RMSFLNSKSN 60
61 SELAPISWVA SGFQKTCGDF RVGRYQISET VNIFSHKVSW TKGPRGIIRI VPQKGDTWAL 120
121 YRNWSPDWNE LTPDDVIYKY EIVEIIDDFT DEQGLTVIPL LKVAGFKAVF HRHMDPKEAR 180
181 RIPKEELFRF SHRVPSRLLT GEEGNNAPKG CHELDPAATP VDLLKVITEV TEDTATQPAK 240
241
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
