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View Structure Prediction Details

Protein: DCI1_ARATH
Organism: Arabidopsis thaliana
Length: 278 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DCI1_ARATH.

Description E-value Query
Range
Subject
Range
gi|20807045, gi|... - gi|20807045|ref|NP_622216.1| 3-hydroxybutyryl-CoA dehydratase [Thermoanaerobacter tengcongensis MB4]...
gi|20807045 - gi|20807045|ref|NP_622216.1| enoyl-CoA hydratase [Thermoanaerobacter tengcongensis MB4]
271.0 [0..7] [275..1]

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Predicted Domain #1
Region A:
Residues: [1-278]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTMESYKTLE IIRKNTDSSV FHLIINRPSH LNALSLDFFI EFPKALSSLD QNPDVSVIIL  60
   61 SGAGKHFCSG IDLNSLSSIS TQSSSGNDRG RSSEQLRRKI KSMQAAITAI EQCRKPVIAA 120
  121 IHGACIGGGV DLITACDIRY CSEDAFFSIK EVDLAIVADL GTLQRLPSIV GYANAMELAL 180
  181 TARRFSGSEA KDLGLVSKVF GSKSELDNGV TTIAEGIGGK SPLAVTGTKA VLLRSREVSV 240
  241 EQGLDYVATW NSAMLISDDL NEAVSAQMMK RKPRFAKL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 55.522879
Match: 1dciA
Description: Dienoyl-CoA isomerase (delta3-delta2-enoyl-CoA isomerase)
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
3-hydroxyacyl-CoA dehydrogenase activity 4.25084649365698 bayes_pls_golite062009
enoyl-CoA hydratase activity 3.92947460544831 bayes_pls_golite062009
CoA carboxylase activity 3.59076614105466 bayes_pls_golite062009
ligase activity, forming carbon-carbon bonds 3.4980371783229 bayes_pls_golite062009
acetyl-CoA carboxylase activity 3.34692152434862 bayes_pls_golite062009
intramolecular oxidoreductase activity, transposing C=C bonds 1.97586838275054 bayes_pls_golite062009
dodecenoyl-CoA delta-isomerase activity 1.80820904754223 bayes_pls_golite062009
catalytic activity 1.46154163027498 bayes_pls_golite062009
3-hydroxybutyryl-CoA epimerase activity 1.31614278936637 bayes_pls_golite062009
propionyl-CoA carboxylase activity 1.20853698666984 bayes_pls_golite062009
racemase and epimerase activity, acting on hydroxy acids and derivatives 1.08284170936757 bayes_pls_golite062009
long-chain-3-hydroxyacyl-CoA dehydrogenase activity 1.03484393216342 bayes_pls_golite062009
ligase activity 0.98581896521131 bayes_pls_golite062009
binding 0.578223105269736 bayes_pls_golite062009
long-chain-enoyl-CoA hydratase activity 0.571617594666499 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle