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View Structure Prediction Details

Protein: FQR1_ARATH
Organism: Arabidopsis thaliana
Length: 204 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FQR1_ARATH.

Description E-value Query
Range
Subject
Range
gi|5031275 - gi|5031275|gb|AAD38143.1|AF139496_1 unknown [Prunus armeniaca]
195.0 [0..1] [202..1]

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Predicted Domain #1
Region A:
Residues: [1-204]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATKVYIVYY SMYGHVEKLA EEIRKGAASV EGVEAKLWQV PETLHEEALS KMSAPPKSES  60
   61 PIITPNELAE ADGFVFGFPT RFGMMAAQFK AFLDATGGLW RAQALAGKPA GIFYSTGSQG 120
  121 GGQETTALTA ITQLVHHGML FVPIGYTFGA GMFEMENVKG GSPYGAGTFA GDGSRQPTEL 180
  181 ELQQAFHQGQ YIASITKKLK GSTA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 39.045757
Match: 1zwkA
Description: Structure of WrbA from Pseudomonas aeruginosa
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
transcription regulator activity 2.32880196921974 bayes_pls_golite062009
binding 1.54529414520518 bayes_pls_golite062009
oxidoreductase activity 1.2698167260481 bayes_pls_golite062009
catalytic activity 0.275631658558537 bayes_pls_golite062009
protein binding 0.191220795572558 bayes_pls_golite062009
transcription factor binding 0.0852528568191628 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle