| Protein: | NTH1_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 379 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NTH1_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
361.0 | [0..1] | [379..1] |
|
Region A: Residues: [1-135] |
1 11 21 31 41 51
| | | | | |
1 MILLVNGGAA TSIHPNAARF YRIGTMSRQI HGAVSSSKHI SLKTQHPLSD SNSELAYGAS 60
61 GSETRVYTRK KRLKQEPFEP LEKYSGKGVN THKLCGLPDI EDFAYKKTIG SPSSSRSTET 120
121 SITVTSVKTA GYPPE
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [136-379] |
1 11 21 31 41 51
| | | | | |
1 NWVEVLEGIR QMRSSEDAPV DSMGCDKAGS FLPPTERRFA VLLGALLSSQ TKDQVNNAAI 60
61 HRLHQNGLLT PEAVDKADES TIKELIYPVG FYTRKATYMK KIARICLVKY DGDIPSSLDD 120
121 LLSLPGIGPK MAHLILHIAW NDVQGICVDT HVHRICNRLG WVSRPGTKQK TTSPEETRVA 180
181 LQQWLPKEEW VAINPLLVGF GQMICTPIRP RCEACSVSKL CPAAFKETSS PSSKLKKSNR 240
241 SKEP
|
| Detection Method: | |
| Confidence: | 56.0 |
| Match: | 1ornA |
| Description: | Endonuclease III |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| DNA N-glycosylase activity | 4.08559331236111 | bayes_pls_golite062009 |
| hydrolase activity, hydrolyzing N-glycosyl compounds | 3.73234184319832 | bayes_pls_golite062009 |
| DNA-(apurinic or apyrimidinic site) lyase activity | 3.12421941323765 | bayes_pls_golite062009 |
| hydrolase activity, acting on glycosyl bonds | 2.54759386266723 | bayes_pls_golite062009 |
| catalytic activity | 2.50389926428623 | bayes_pls_golite062009 |
| oxidized base lesion DNA N-glycosylase activity | 1.80199518353554 | bayes_pls_golite062009 |
| alkylbase DNA N-glycosylase activity | 1.75218522602775 | bayes_pls_golite062009 |
| hydrolase activity | 1.39000450534744 | bayes_pls_golite062009 |
| DNA-3-methyladenine glycosylase I activity | 1.14337995879633 | bayes_pls_golite062009 |
| oxidized purine base lesion DNA N-glycosylase activity | 0.473206156100251 | bayes_pls_golite062009 |
| uracil DNA N-glycosylase activity | 0.29478804124408 | bayes_pls_golite062009 |
| oxidized pyrimidine base lesion DNA N-glycosylase activity | 0.253198605718519 | bayes_pls_golite062009 |
