| Protein: | PUS4_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 477 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PUS4_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
288.0 | [0..62] | [454..3] |
|
Region A: Residues: [1-77] |
1 11 21 31 41 51
| | | | | |
1 MAKWRLATAT LRRQLQSSSP TISTFKNPTK ALSAAAHQST RSYSTTQTDD SRGKWLTLPP 60
61 FSPTIDGTAV GKDLLSD
|
| Detection Method: |  |
| Confidence: | 7.0 |
| Match: | 2uu9D |
| Description: | No description for 2uu9D was found. |
|
Region A: Residues: [78-477] |
1 11 21 31 41 51
| | | | | |
1 GDSVKSSTDN SKTTALRWIL RCRPDLPRTL VQKLFRLRQV RREMSMSVDG DELQRSQLKR 60
61 VAAKESLNVG DRIYLPLSVD NDTPQTPPAK KESFQCSDEE RKFVCSLVLY KDPAIIVLNK 120
121 PHGLAVQGGS GIKTSIDELA ASCLKFDKSE SPRLVHRLDR DCSGLLVLAR TQTAATVLHS 180
181 IFREKTTGAS AYGVKKNVKS LKRKYMALVI GCPPRQRGQI SAPLRKVVVD DGKSERITVN 240
241 DNGELVSTQH AITEYRVIES SPHGYTWLEL RPLTGRKHQL RVHCAEVLGT PIVGDYKYGW 300
301 QAHKAREPFV SSENNPTKQS SSPFGLDLDG GDVSSKQPHL HLHSKQIDLP NISQLLEKMQ 360
361 VSSDSDISDL DSLKFDAPLP SHMQLSFNLL KSRVETCDKN
|
| Detection Method: | |
| Confidence: | 68.0 |
| Match: | 1qyuA |
| Description: | Structure of the catalytic domain of 23S rRNA pseudouridine synthase RluD |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| pseudouridine synthase activity | 5.60483019625575 | bayes_pls_golite062009 |
| intramolecular transferase activity | 4.62815459483632 | bayes_pls_golite062009 |
| isomerase activity | 3.43067391737824 | bayes_pls_golite062009 |
| catalytic activity | 2.39224964671205 | bayes_pls_golite062009 |
