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View Structure Prediction Details

Protein: PI5K4_ARATH
Organism: Arabidopsis thaliana
Length: 779 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PI5K4_ARATH.

Description E-value Query
Range
Subject
Range
PI5K5_ARATH - Phosphatidylinositol 4-phosphate 5-kinase 5 OS=Arabidopsis thaliana GN=PIP5K5 PE=2 SV=1
619.0 [0..1] [779..1]

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Predicted Domain #1
Region A:
Residues: [1-244]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKEQSCVLK AWEVTVRKTQ QAKKRANSIF GTVSVAPQTD DDATTTTEEN DDETSTNRSS  60
   61 IGELYHAERI LPNGDYYTGQ WYDSFPHGHG KYLWTDGCMY IGDWYNGKTM GRGKFGWPSG 120
  121 ATYEGEFKSG YMDGVGLYTG PSGDTYKGQW VMNLKHGHGI KRFANGDVYD GEWRRGLQEA 180
  181 QGKYQWRDGS YYMGEWKNAT ICGKGTFIWT DGNRYDGFWD DGFPRGNGTF KWADGSFYVG 240
  241 HWSN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 7.522879
Match: 2bibA
Description: Crystal structure of the complete modular teichioic acid phosphorylcholine esterase Pce (CbpE) from Streptococcus pneumoniae
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [245-370]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DPEEMNGTYY PSGDDGSPEW DPKDVFTNLS EYKICSGERV PVLPSQKKLS VWNSSKRVEK  60
   61 PRRMSVDGRV SVGVDRAFEK MNMWGTESGE GAADIDSTTR RDLDAEMMRL EAEGFIQSLR 120
  121 PSPAPM

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 19.30103
Match: 1h3iA
Description: Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain; Histone H3 K4-specific methyltransferase SET7/9 catalytic domain
Matching Structure (courtesy of the PDB):

Predicted Domain #3
Region A:
Residues: [371-779]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RLPRAGRKQG ETISKGHRNY ELMLNLQLGI RHAVGKQAPV VSLDLKHSAF DPKEKVWTRF  60
   61 PPEGTKYTPP HQSSEFKWKD YCPLVFRSLR KLFKVDPADY MLSICGNDAL RELSSPGKSG 120
  121 SFFYLTNDDR YMIKTMKKSE TKVLLRMLAA YYNHVRAFEN TLVIRFYGLH CVKLTGPIQK 180
  181 KVRFVIMGNL FCSEYSIHRR FDLKGSSLGR TTDKPESEIN SNTILKDLDL NFIFRLQKAW 240
  241 YQEFIRQVDK DCEFLEQERI MDYSLLVGIH FREASVAGEL IPSGARTPIG EFEDESAPRL 300
  301 SRADVDQLLS DPTRWASIRL GGNMPARAER TMRRSDCEFQ LVGEPTGEYY EVVMIFGIID 360
  361 ILQDYDISKK LEHAYKSIQY DPTSISAVDP RLYSRRFRDF IFKVFTEDN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 93.045757
Match: 1bo1A
Description: Phosphatidylinositol phosphate kinase IIbeta, PIPK IIbeta
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
inositol or phosphatidylinositol kinase activity 4.06973114636425 bayes_pls_golite062009
phosphatidylinositol phosphate kinase activity 3.5005619620026 bayes_pls_golite062009
phosphotransferase activity, alcohol group as acceptor 3.04766540645426 bayes_pls_golite062009
lipid kinase activity 3.03220928059157 bayes_pls_golite062009
1-phosphatidylinositol-4-phosphate 5-kinase activity 3.00599233846946 bayes_pls_golite062009
kinase activity 2.85461858246731 bayes_pls_golite062009
transferase activity, transferring phosphorus-containing groups 2.23569102640176 bayes_pls_golite062009
catalytic activity 1.87792712964225 bayes_pls_golite062009
transferase activity 1.20817067352467 bayes_pls_golite062009
signal transducer activity 1.15068527302487 bayes_pls_golite062009
molecular transducer activity 1.15068527302487 bayes_pls_golite062009
binding 1.02604095388529 bayes_pls_golite062009
protein kinase activity 0.887549500886727 bayes_pls_golite062009
protein binding 0.382966234080422 bayes_pls_golite062009
protein serine/threonine kinase activity 0.0651942184115614 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle