| Protein: | ATB40_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 217 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ATB40_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
124.0 | [0..30] | [116..1] |
|
Region A: Residues: [1-130] |
1 11 21 31 41 51
| | | | | |
1 MNYTVDDQNM AFISQLYPDV YTQIVQPVGE VKQPKRRRKK TKGSVASADG GNGLFRKRKL 60
61 TDEQVNMLEM SFGDEHKLES ERKDRLAAEL GLDPRQVAVW FQNRRARWKN KRLEEEYNKL 120
121 KNSHDNVVVD
|
| Detection Method: |  |
| Confidence: | 21.69897 |
| Match: | 1b8iA |
| Description: | Ultrabithorax (ubx) homeodomain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.334577365229545 | bayes_pls_golite062009 |
| transcription regulator activity | 0.0696342306231097 | bayes_pls_golite062009 |
|
Region A: Residues: [131-217] |
1 11 21 31 41 51
| | | | | |
1 KCRLESEVIQ LKEQLYDAER EIQRLAERVE GGSSNSPISS SVSVEANETP FFGDYKVGDD 60
61 GDDYDHLFYP VPENSYIDEA EWMSLYI
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
