| Protein: | PUB13_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 660 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PUB13_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
301.0 | [0..8] | [627..54] |
|
|
297.0 | [0..2] | [636..3] |
|
Region A: Residues: [1-92] |
1 11 21 31 41 51
| | | | | |
1 MEEEKASAAQ SLIDVVNEIA AISDYRITVK KLCYNLARRL KLLVPMFEEI RESNEPISED 60
61 TLKTLMNLKE AMCSAKDYLK FCSQGSKIYL VM
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.984 | a.29.13 | Description not found. |
|
Region A: Residues: [93-262] |
1 11 21 31 41 51
| | | | | |
1 EREQVTSKLM EVSVKLEQSL SQIPYEELDI SDEVREQVEL VLSQFRRAKG RVDVSDDELY 60
61 EDLQSLCNKS SDVDAYQPVL ERVAKKLHLM EIPDLAQESV ALHEMVASSG GDVGENIEEM 120
121 AMVLKMIKDF VQTEDDNGEE QKVGVNSRSN GQTSTAASQK IPVIPDDFRC
|
| Detection Method: | |
| Confidence: | 6.39794 |
| Match: | 2qizA |
| Description: | No description for 2qizA was found. |
|
Region A: Residues: [263-660] |
1 11 21 31 41 51
| | | | | |
1 PISLEMMRDP VIVSSGQTYE RTCIEKWIEG GHSTCPKTQQ ALTSTTLTPN YVLRSLIAQW 60
61 CEANDIEPPK PPSSLRPRKV SSFSSPAEAN KIEDLMWRLA YGNPEDQRSA AGEIRLLAKR 120
121 NADNRVAIAE AGAIPLLVGL LSTPDSRIQE HSVTALLNLS ICENNKGAIV SAGAIPGIVQ 180
181 VLKKGSMEAR ENAAATLFSL SVIDENKVTI GALGAIPPLV VLLNEGTQRG KKDAATALFN 240
241 LCIYQGNKGK AIRAGVIPTL TRLLTEPGSG MVDEALAILA ILSSHPEGKA IIGSSDAVPS 300
301 LVEFIRTGSP RNRENAAAVL VHLCSGDPQH LVEAQKLGLM GPLIDLAGNG TDRGKRKAAQ 360
361 LLERISRLAE QQKETAVSQP EEEAEPTHPE STTEAADT
|
| Detection Method: | |
| Confidence: | 52.221849 |
| Match: | 1ialA |
| Description: | Importin alpha |
Matching Structure (courtesy of the PDB): |
|
