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Protein Overview: gi|222624660, gi...

General Information:
Name(s) found: gi|222624660 [NCBI NR]
gi|215768510 [NCBI NR]
gi|115452221 [NCBI NR]
gi|113548182 [NCBI NR]
gi|108707460 [NCBI NR]
Description(s) found:
Found 7 descriptions.
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  • gi|222624660|gb|EEE58792.1| hypothetical protein OsJ_10327 [Oryza sativa Japonica Group] [NCBI NR]
  • gi|215768510|dbj|BAH00739.1| unnamed protein product [Oryza sativa Japonica Group] [NCBI NR]
  • gi|115452221|ref|NP_001049711.1| Os03g0275900 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|113548182|dbj|BAF11625.1| Os03g0275900 [Oryza sativa Japonica Group] [NCBI NR]
  • gi|108707460|gb|ABF95255.1| Spotted leaf protein 11, putative, expressed [Oryza sativa (japonica cultivar-group)] [NCBI NR]
    • Organism: Oryza sativa Japonica Group
    Length: 726 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDEEAKPNPN ADAAPAAAEA AASSPPPLSS SESAEGKDKE EEKEEEEEEE AGDLVEKLVE  60
   61 LVEEIAAISD FRNAYRRQFC NLSRRIRLLA PMLEEAKEGP RPLPDVSYSA LRRLREALAD 120
  121 SRELLRLGVS GSKISLVLER EKIMKSFQDI TARLEQALGL ISFDELDISD EVREQVELVH 180
  181 AQFKRAKERS DPSDDDLFND LVSVYNSSTS ANVDPDILQR LSDKLQLATI SDLNQESLIL 240
  241 HEMASGGDPG AVVEKMSMLL KRIKDFVQSR DPEMGTPVNT TELSGKDNMA SLIVPDDFRC 300
  301 PISLDLMKDP VIVATGQTYE RGCIERWLEA GHDTCPKTQQ KLPNKSLTPN YVLRSLIAQW 360
  361 CEANGMEPPK RAAQHHNAPA SCTAAEHSNV VELLQKLLSQ NLEDQREAAG MLRQLAKRSP 420
  421 ENRACIGDAG AIPILVSLLS ITDVSTQEHV VTALLNLSIY EENKARIITS GAVPGVVHVL 480
  481 KRGSMEAREN SAATLFSLSL VDENKITIGA SGAIPALVLL LSNGSQRGKR DAATALFNLC 540
  541 IYQGNKGKAV RAGLIPVLLG LVTETESGMM DEALAILAIL SSHPEGKTAI SSANAIPMLV 600
  601 GVIRNGSARN KENAAAVLVH LCNGEQQQQH LAEAQEQGIV TLLEELAKSG TDRGKRKAIQ 660
  661 LLERMNRFLM QQSQAQAQAE AMAQAHAHAQ SQAQVQALNE AQSQVEMQVE QLLLPTTSHL 720
  721 SDRRDG

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..70] deduced N/A No confident structure predictions are available.
    2 View Details [71..210] PSI-BLAST 18.0 Crystal structure of the CHIP U-box E3 ubiquitin ligase
    3 View Details [211..271] deduced N/A No confident structure predictions are available.
    4 View Details [272..371] PSI-BLAST 8.69897 NMR solution structure of the U box domain from AtPUB14, an armadillo repeat containing protein from Arabidopsis thaliana
    5 View Details [372..552] FFAS03 3.59 Crystal structure of the HspBP1 core domain
    6 View Details [553..726] PSI-BLAST 4.69897 AP1 clathrin adaptor core

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2 No functions predicted.
    3 No functions predicted.
    4
    Term Confidence Notes
  • binding
    		•  0.0938889867773109 bayes_pls_golite062009
    5
    Term Confidence Notes
  • binding
    		•  0.267627928716605 bayes_pls_golite062009
    6 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.91

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle