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View Structure Prediction Details

Protein: SCP7_ARATH
Organism: Arabidopsis thaliana
Length: 437 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SCP7_ARATH.

Description E-value Query
Range
Subject
Range
SCP3_ARATH - Serine carboxypeptidase-like 3 OS=Arabidopsis thaliana GN=SCPL3 PE=2 SV=1
479.0 [0..1] [437..1]

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Predicted Domain #1
Region A:
Residues: [1-437]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MANDYVSTVL LLLSLLIFLS QRTDSASIVK SLPGFDGPLP FELETGYIGV GEEEEVQLFY  60
   61 YFIKSERNPQ EDPLLLWLSG GPGCSSISGL LYENGPVNVK IEVYNGTLPS LVSTTYSWTK 120
  121 VSSIIYLDQP VGTGFSYSRT KLVNKPSDSG EAKRIHEFLH KWLGKHQEFS SNPFYVGGDS 180
  181 YCGMVIPALV QEISKGNYVC CKPPINLQGY ILGNPSTENE VDINYRIPYA HGMALISDEL 240
  241 YESMKRICKG KYENVDPRNT KCLKLVGEYQ KCTKRINKAL IITPECVDTS PDCYMYRYLL 300
  301 TTYWANDENV QRALHVNKGS IGEWVRCYFE IPYNHDIKSS VPYHMNNSID GYASLIFSGD 360
  361 HDMEVPYLGT QAWIRSLNYS LIDDWRPWMI GDQIAGYTRT YANKMAFATI KGGGHTPEYK 420
  421 PEESYIMFQR WISGQPL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 97.30103
Match: 1ivyA
Description: Human 'protective protein', HPP
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
hydrolase activity 4.09944423676394 bayes_pls_golite062009
peptidase activity 2.49064988313037 bayes_pls_golite062009
peptidase activity, acting on L-amino acid peptides 2.10044305272656 bayes_pls_golite062009
catalytic activity 1.39629727416851 bayes_pls_golite062009
palmitoyl-(protein) hydrolase activity 1.3250951453762 bayes_pls_golite062009
palmitoyl-CoA hydrolase activity 0.815337671271829 bayes_pls_golite062009
hydrolase activity, acting on ester bonds 0.541803897301601 bayes_pls_golite062009
endopeptidase activity 0.43631945855397 bayes_pls_golite062009
binding 0.351031277062254 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle