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View Structure Prediction Details

Protein: SCP3_ARATH
Organism: Arabidopsis thaliana
Length: 441 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SCP3_ARATH.

Description E-value Query
Range
Subject
Range
SCP2_ARATH - Serine carboxypeptidase-like 2 OS=Arabidopsis thaliana GN=SCPL2 PE=2 SV=1
472.0 [0..25] [441..25]

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Predicted Domain #1
Region A:
Residues: [1-441]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASNYVFSVL RSLLLLIHTV FLGQHHVSSA TIIKSLPGFE GPLPFELETG YIGVGEEEEV  60
   61 QLFYYFIKSE RNPKEDPLLL WLSGGPGCSS ISGLLFENGP LAMKLDVYNG TLPSLVSTTY 120
  121 SWTKASSMIF LDQPVGAGFS YSRTQLLNKP SDSGEAKRIH EFLQKWLGKH QEFSSNPFYV 180
  181 GGDSYSGMVV PATVQEISKG NYECCNPPIN LQGYVLGNPL TDFVYDYNSR IPFAHGMALI 240
  241 SDELFESLKK TCKGDYRNVH PRNTECLKFI EEFNKCTNSI CQRRIIDPFC ETETPNCYIY 300
  301 RFLLAAYWAN DETVRKALQI KKETIGEWVR CHYGIPYNYD IKSSIPYHMN NSINGYRSLI 360
  361 YSGDHDFEVP FLGTQAWIRS LNYSVIDDWR PWMIKDQIAG YTRTYANKMT FATIRGGGHT 420
  421 IEFKPEEASI MFQRWIKGQP L

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 99.0
Match: 1ivyA
Description: Human 'protective protein', HPP
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
hydrolase activity 4.09944423676394 bayes_pls_golite062009
peptidase activity 2.49064988313037 bayes_pls_golite062009
peptidase activity, acting on L-amino acid peptides 2.10044305272656 bayes_pls_golite062009
catalytic activity 1.39629727416851 bayes_pls_golite062009
palmitoyl-(protein) hydrolase activity 1.3250951453762 bayes_pls_golite062009
hydrolase activity, acting on ester bonds 0.541803897301601 bayes_pls_golite062009
endopeptidase activity 0.35106325845064 bayes_pls_golite062009
binding 0.351031277062254 bayes_pls_golite062009
palmitoyl-CoA hydrolase activity 0.1174692258176 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle