| Protein: | gi|15238188, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 687 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15238188, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
276.0 | [0..8] | [677..86] |
|
Region A: Residues: [1-582] |
1 11 21 31 41 51
| | | | | |
1 MHGRKREEDP NPEETAAKAL ELRSLQSQFM SNHHQKIYTK EAIQLSAKLL ITNPEFYTAW 60
61 NYPKLAFESR LDEDSDPSLV NSIIDEELGV VQNALERNVK SYGAWYHRKW VLSKKGHYYP 120
121 SLENELQLLN DYQKQAHQKQ DDEKQDDPSR NFHAWNYRRF VVELTKTSEE DELQYTTDMI 180
181 SDISFTIYSA WHYRSVLVSS LVAKKADGFM PKETIRRELD YVHSAIFTLE EKQSGWFYYL 240
241 WLLDQTVKME IPLRFSSWPS DGSIIILSGP DCFNASSSTT KLTTFCSESG SFPLILYFDQ 300
301 AVSGVSSSTV TIGSELKDLV WEPVSDKKNS QVDSCVWVAR LKFDCREPCF SRKETKVKVS 360
361 LGGIVSSMGC NLTAPYEFVF TLRIHDTVEV ELSQQESIVS WTDGFDNWDD NALSNDLNSL 420
421 TALNADTGFE WRKKAIKIEI ELFRTLPDSK IGKLILARLL MAEETMISNG VHYKEILQLY 480
481 NDLMALDSWH NQYYKDEHSV ALIHKVTSRT ESMSRHLFRY RNMNNIICLR LNNLTLSRIA 540
541 AVEKLLFVQM LDLSHNELHS AEGLEAMQLL CCLNLSHNRI RS
|
| Detection Method: |  |
| Confidence: | 43.30103 |
| Match: | 1dceA |
| Description: | Rab geranylgeranyltransferase alpha-subunit, N-terminal domain; Rab geranylgeranyltransferase alpha-subunit, insert domain; Rab geranylgeranyltransferase alpha-subunit, C-terminal domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| protein farnesyltransferase activity | 5.38889352801159 | bayes_pls_golite062009 |
|
Region A: Residues: [583-687] |
1 11 21 31 41 51
| | | | | |
1 FSALDSLRHL KQLRVLDVSH NHICGELPVD TTRYLCSSPL SNSGETGREV PNKYQDAYLV 60
61 LRDLMKLKQL DIRGNDLIFA GEEFSSFVRQ VVPKLVWLDG HKLTS
|
| Detection Method: | |
| Confidence: | 29.522879 |
| Match: | 2omuA |
| Description: | No description for 2omuA was found. |
