| Protein: | LRP6C_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 455 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for LRP6C_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
247.0 | [0..82] | [455..24] |
|
Region A: Residues: [1-130] |
1 11 21 31 41 51
| | | | | |
1 MAQMQREEVE SVTTEKKRLD GGGGSSGAQA TAFKFNAQAP EFVPRSHTTA PAPQVSPVSG 60
61 YFYPCFHYNG GCIGGCGGGV CGGGGTGVGT QSSDWIYVGG GDPTAQHQHV HDPAAAFYIS 120
121 NPAVQFPASQ
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [131-335] |
1 11 21 31 41 51
| | | | | |
1 NSSSSSKNLL SDDLRLKIVK QVEYQFTDMS LLANESISKH ISKDPEGYVP VSYIASTKKI 60
61 KALTSNHHLV SLALRSSSKL VVSEDGKKVK RTSQFTDRDR EELQGRTVVA ENLPDDHSYQ 120
121 NLEKIFGVVG NVKAIRICHP PESNSSRPKG DFLMSNKIHA LIEYDNTVIA DKAVEKLNDE 180
181 RNWRKGLRVR LLLRCSPKSV LKNRR
|
| Detection Method: | |
| Confidence: | 39.0 |
| Match: | 1po6A |
| Description: | Crystal Structure of UP1 Complexed With d(TAGG(6MI)TTAGGG): A Human Telomeric Repeat Containing 6-methyl-8-(2-deoxy-beta-ribofuranosyl)isoxanthopteridine (6MI) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.950788308762215 | bayes_pls_golite062009 |
| nucleic acid binding | 0.29562225149076 | bayes_pls_golite062009 |
|
Region A: Residues: [336-455] |
1 11 21 31 41 51
| | | | | |
1 NFDGILIDDE LPSYESGEDS PRLHLTESQL DNDGDDNNVG GLWGKGRGKG RGRSPRSYAV 60
61 GGGGRSFGIG LGVSLGIPSL GSHESSSPKT ATKGPRMPDG TRGFTMGRGK PSISLSPNNL 120
121
|
| Detection Method: | |
| Confidence: | 29.522879 |
| Match: | 3sxlA |
| Description: | Sex-lethal protein |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.950788308762215 | bayes_pls_golite062009 |
| nucleic acid binding | 0.29562225149076 | bayes_pls_golite062009 |
