| Protein: | MS1_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 672 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MS1_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
850.0 | [0..1] | [672..1] |
|
|
667.0 | [0..15] | [664..13] |
|
Region A: Residues: [1-196] |
1 11 21 31 41 51
| | | | | |
1 MANLIRTDHQ QHIPKKRKRG ESRVFRLKTF GESGHPAEMN ELSFRDNLAK LLEFGHFESS 60
61 GLMGSWSFQL EIQRNPNPLY VLLFVVEEPI EASLNLRCNH CQYVGWGNQM ICNKKYHFVI 120
121 PSKETMAAFL KLEGGGYAFP EKESFSHLVE LQGHVLHGFF HSNGFGHLLS LNGIETGSDL 180
181 TGHQVMDLWD RLCTGL
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [197-319] |
1 11 21 31 41 51
| | | | | |
1 KARKIGLNDA SHKKGMELRL LHGVAKGEPW FGRWGYRFGS GTYGVTQKIY EKALESVRNI 60
61 PLCLLNHHLT SLNRETPILL SKYQSLSTEP LITLSDLFRF MLHLHSRLPR DNYMSNSRNQ 120
121 IIS
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.476 | N/A | N/A | a.8.4 | Description not found. |
| View | Download | 0.465 | N/A | N/A | a.39.1 | EF-hand |
| View | Download | 0.465 | N/A | N/A | a.39.1 | EF-hand |
| View | Download | 0.346 | N/A | N/A | a.259.1 | Description not found. |
| View | Download | 0.328 | N/A | N/A | a.39.1 | EF-hand |
| View | Download | 0.328 | N/A | N/A | a.39.1 | EF-hand |
| View | Download | 0.325 | N/A | N/A | a.39.1 | EF-hand |
| View | Download | 0.325 | N/A | N/A | a.39.1 | EF-hand |
| View | Download | 0.299 | N/A | N/A | a.39.1 | EF-hand |
| View | Download | 0.293 | N/A | N/A | a.118.13 | Arp2/3 complex 16 kDa subunit ARPC5 |
|
Region A: Residues: [320-493] |
1 11 21 31 41 51
| | | | | |
1 IDSTNCRWSQ KRIQMAIKVV IESLKRVEYR WISRQEVRDA ARNYIGDTGL LDFVLKSLGN 60
61 QVVGNYLVRR SLNPVKKVLE YSLEDISNLL PSSNNELITL QNQNSMGKMA TNGHNKITRG 120
121 QVMKDMFYFY KHILMDYKGV LGPIGGILNQ IGMASRAILD AKYFIKEYHY IRDT
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [494-611] |
1 11 21 31 41 51
| | | | | |
1 SAKTLHLDRG EELGIFCTIA WKCHHHNNEI KVPPQECIVV KKDATLSEVY GEAERVFRDI 60
61 YWELRDVVVE SVVGGQIEIT RVDEMALNGN KGLVLEGNVG MMMNIEVTKC YEDDDKKK
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [612-672] |
1 11 21 31 41 51
| | | | | |
1 DKRIECECGA TEEDGERMVC CDICEVWQHT RCVGVQHNEE VPRIFLCQSC DQHLIPLSFL 60
61 P
|
| Detection Method: | |
| Confidence: | 12.69897 |
| Match: | 1weeA |
| Description: | Solution structure of PHD domain in PHD finger family protein |
Matching Structure (courtesy of the PDB): |
|
