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Protein Overview: gi|255678941, gi...

General Information:
Name(s) found: gi|51535875 [NCBI NR]
gi|255678941 [NCBI NR]
gi|125605899 [NCBI NR]
Description(s) found:
Found 4 descriptions.
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  • gi|51535875|dbj|BAD37958.1| putative male sterility 1 protein [Oryza sativa Japonica Group] [NCBI NR]
  • gi|255678941|dbj|BAF25233.2| Os09g0449000 [Oryza sativa Japonica Group] [NCBI NR]
  • gi|125605899|gb|EAZ44935.1| hypothetical protein OsJ_29577 [Oryza sativa Japonica Group] [NCBI NR]
    • Organism: Oryza sativa Japonica Group
    Length: 679 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPKMVISLG SSRRRKRGEM LFRFEAFCQP GYPANFAGAG GFRDNVRTLL GFAHLEAGVH  60
   61 GETKCWSFQL ELHRHPPTVV RLFVVEEEVA ASPHRQCHLC RHIGWGRHLI CSKRYHFLLP 120
  121 RRESAAEADG LCFAINHGGG GGAEKASSKG TTTTASSRGH LLHGVVHLNG YGHLVALHGL 180
  181 EGGSDFVSGH QIMDLWDRIC SALHVRTVSL VDTARKGHME LRLLHGVAYG ETWFGRWGYR 240
  241 YGRPSYGVAL PSYRQSLHVL GSMPLCVLVP HLSCFSQELP MVVTKYQAIS GHKLLSLGDL 300
  301 LRFMLELRAR LPATSVTAMD YRGIMSEASC RWSAKRVDMA ARAVVDALRR AEPAARWVTR 360
  361 QEVRDAARAY IGDTGLLDFV LKSLGNHIVG NYVVRRTMNP VTKVLEYCLE DVSSVLPAVA 420
  421 AGGGVPAQGK MRVRFQLTRA QLMRDLVHLY RHVLKEPSQA LTGGAFGAIP VAVRMVLDIK 480
  481 HFVKDYHEGQ AAASSNGGGG FGHPHINLCC TLLVSNGSPE LAPPYETVTL PAHATVGELK 540
  541 WEAQRVFSEM YLGLRSFAAD SVVGVGADQE GLPVLGLVDV GSAVVVQGSV GEQINGEDHE 600
  601 RKEEAAAAAV CEGSGGGERV VDCACGAVDD DGERMACCDI CEAWQHTRCA GIADTEDAPH 660
  661 VFLCSRCDND VVSFPSFNC

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..203] deduced N/A No confident structure predictions are available.
    2 View Details [204..315] MSA 2.015966 View MSA. No confident structure predictions are available.
    3 View Details [316..399] deduced N/A No confident structure predictions are available.
    4 View Details [400..491] PSI-BLAST 15.09691 No description for 2eqyA was found.
    5 View Details [492..564] deduced N/A Confident ab initio structure predictions are available.
    6 View Details [565..679] PSI-BLAST 10.522879 Solution structure of PHD domain in PHD finger family protein


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.61

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle