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View Structure Prediction Details

Protein: gi|10177246, gi|...
Organism: Arabidopsis thaliana
Length: 324 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|10177246, gi|....

Description E-value Query
Range
Subject
Range
gi|91805447 - gi|91805447|gb|ABE65452.1| zinc finger family protein [Arabidopsis thaliana]
404.0 [0..32] [318..2]

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Predicted Domain #1
Region A:
Residues: [1-159]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSIPNGLNS YVDDTVNICG FTPIEMSSNL RNHESKMVHS MFNTSDHTNH HGLFSSSRVF  60
   61 NFYQDSHVSS SSFGFNNSHM AYHMRKNMVS TFGMPCITQN SNNPHLSQIS ITQTITNSYS 120
  121 AIVPTYNLIT SQNEYQRAKE PNIFNPPFYP PNFVDKNVG

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [160-324]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NQCQILNPTP LNTIFPHQAS IFPRNVDKFS FSPKQNPHQY VSYRQPLKRH CRPTKKFENT  60
   61 FSDFDSGKDI EYDGRTHSLP YEKYGPYTCP KCNSVFDTSQ KFAAHISSMH YKNESIEEKF 120
  121 KRYNARNKKR LRKRNQMIHE ESNNIQPEEI VAEESGGDNN IASSK

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.05
Match: 1zr9A
Description: Solution Structure of a Human C2H2-type Zinc Finger Protein
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 0.304205134456748 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle