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View Structure Prediction Details

Protein: gi|10177246, gi|...
Organism: Arabidopsis thaliana
Length: 324 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|10177246, gi|....

Description E-value Query
Range
Subject
Range
gi|91805447 - gi|91805447|gb|ABE65452.1| zinc finger family protein [Arabidopsis thaliana]
404.0 [0..32] [318..2]

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Predicted Domain #1
Region A:
Residues: [1-159]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSIPNGLNS YVDDTVNICG FTPIEMSSNL RNHESKMVHS MFNTSDHTNH HGLFSSSRVF  60
   61 NFYQDSHVSS SSFGFNNSHM AYHMRKNMVS TFGMPCITQN SNNPHLSQIS ITQTITNSYS 120
  121 AIVPTYNLIT SQNEYQRAKE PNIFNPPFYP PNFVDKNVG

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [160-324]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NQCQILNPTP LNTIFPHQAS IFPRNVDKFS FSPKQNPHQY VSYRQPLKRH CRPTKKFENT  60
   61 FSDFDSGKDI EYDGRTHSLP YEKYGPYTCP KCNSVFDTSQ KFAAHISSMH YKNESIEEKF 120
  121 KRYNARNKKR LRKRNQMIHE ESNNIQPEEI VAEESGGDNN IASSK

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.05
Match: 1zr9A
Description: Solution Structure of a Human C2H2-type Zinc Finger Protein
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 0.304205134456748 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle