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Protein Overview: gi|10177246, gi|...

General Information:
Name(s) found: gi|15237189 [NCBI NR]
gi|10177246 [NCBI NR]
Description(s) found:
Found 10 descriptions.
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  • gi|15237189|ref|NP_197690.1| zinc finger (C2H2 type) family protein [Arabidopsis thaliana] [NCBI NR]
  • gi|10177246|dbj|BAB10620.1| C2H2-type zinc finger protein-like [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 324 amino acids

    Gene Ontology:
    Cellular Component: intracellular [IEA]
    Biological Process: regulation of transcription [TAS]
    Molecular Function: nucleic acid binding [ISS]
    zinc ion binding [ISS]
    transcription factor activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSIPNGLNS YVDDTVNICG FTPIEMSSNL RNHESKMVHS MFNTSDHTNH HGLFSSSRVF  60
   61 NFYQDSHVSS SSFGFNNSHM AYHMRKNMVS TFGMPCITQN SNNPHLSQIS ITQTITNSYS 120
  121 AIVPTYNLIT SQNEYQRAKE PNIFNPPFYP PNFVDKNVGN QCQILNPTPL NTIFPHQASI 180
  181 FPRNVDKFSF SPKQNPHQYV SYRQPLKRHC RPTKKFENTF SDFDSGKDIE YDGRTHSLPY 240
  241 EKYGPYTCPK CNSVFDTSQK FAAHISSMHY KNESIEEKFK RYNARNKKRL RKRNQMIHEE 300
  301 SNNIQPEEIV AEESGGDNNI ASSK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..159] deduced N/A No confident structure predictions are available.
    2 View Details [160..324] FFAS03 1.05 Solution Structure of a Human C2H2-type Zinc Finger Protein

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • binding
    		•  0.304205134456748 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle