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View Structure Prediction Details

Protein: gi|20197980, gi|...
Organism: Arabidopsis thaliana
Length: 218 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|20197980, gi|....

Description E-value Query
Range
Subject
Range
gi|52784100, gi|... - gi|52784100|ref|YP_089929.1| YnaD [Bacillus licheniformis ATCC 14580], gi|52346602|gb|AAU39236.1| Yn...
134.0 [0..10] [198..3]

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Predicted Domain #1
Region A:
Residues: [1-218]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVTRMATKVS LEGKRVVLVP YMAEHVPKYH QWMQDSALLE ATGSEPLSLE QEYEMQLSWT  60
   61 QDPNKRTFIV LDKDFVKGDL AHGQPHVEAM TGDVNIYMND VDDPKVAEVE IMIAEPRSRG 120
  121 KGLGKESVLI MMAYGVKNLE IHKFTAKIGE SNTASLSLFR KLGFEESSYS GIFKEVTLEY 180
  181 PVTNLRREEL LKLLDEVIRH THSSNNPSDS LLSGEATA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 21.69897
Match: 1nslA
Description: Probable acetyltransferase YdaF
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
N-acetyltransferase activity 6.09290029352595 bayes_pls_golite062009
N-acyltransferase activity 6.08913516066746 bayes_pls_golite062009
acetyltransferase activity 5.86411968036951 bayes_pls_golite062009
histone acetyltransferase activity 5.85159161781386 bayes_pls_golite062009
lysine N-acetyltransferase activity 5.85159161781386 bayes_pls_golite062009
acyltransferase activity 4.72881921515185 bayes_pls_golite062009
transferase activity, transferring acyl groups 4.70793039001114 bayes_pls_golite062009
transferase activity, transferring acyl groups other than amino-acyl groups 4.69837915971204 bayes_pls_golite062009
transferase activity 3.5778020729894 bayes_pls_golite062009
myristoyltransferase activity 3.50779447340192 bayes_pls_golite062009
glycylpeptide N-tetradecanoyltransferase activity 3.50779447340192 bayes_pls_golite062009
3.29707445389818 bayes_pls_golite062009
catalytic activity 1.97933499002461 bayes_pls_golite062009
binding 0.632534855891142 bayes_pls_golite062009
nucleic acid binding 0.522132859536345 bayes_pls_golite062009
transcription regulator activity 0.0766125702622449 bayes_pls_golite062009
protein binding 0.0596470189462109 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle