| Protein: | gi|25407138, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 658 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|25407138, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
491.0 | [0..2] | [652..5] |
|
Region A: Residues: [1-132] |
1 11 21 31 41 51
| | | | | |
1 MDSKGVLMPL IHEHLMMPWK NLKRGPCCGC CGRFEAISDG YYCKTCDFFV RKNCADEPSE 60
61 YIKHPSHPKH TLQLLRPERP TNFCNLCGRM CPIFYRCDLC DFDMDLYCSK YPPPEVIDIS 120
121 KTHHHRLTLL KK
|
| Detection Method: |  |
| Confidence: | 2.15 |
| Match: | 1v5nA |
| Description: | Solution Structure of DC1 Domain of PDI-like Hypothetical Protein from Arabidopsis thaliana |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [133-242] |
1 11 21 31 41 51
| | | | | |
1 WIKQCICAKC CKIIGNEFPY NCHECDLSFH VDCVWYPPEL ELRLEVNHSY HSLHPLKLYA 60
61 KGQLPDYSDG KCRLCARKID ETFFFHCSPC NFTLDKVCVL RPPQQSLLNL
|
| Detection Method: | |
| Confidence: | 4.522879 |
| Match: | 1xa6A |
| Description: | Crystal Structure of the Human Beta2-Chimaerin |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [243-353] |
1 11 21 31 41 51
| | | | | |
1 KAHDHQLTLL PKLDSFTCNA CGLKGDRSPY VCFQCGFMIH QDCLGLPRLI NINRHDHRVS 60
61 RTSVLGVVNS VCGVCRKKVD WSYGGFSCQR CHGYVVHSKC ATRKDVWNGK E
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.531 | N/A | N/A | b.40.4 | Nucleic acid-binding proteins |
| View | Download | 0.508 | N/A | N/A | d.93.1 | SH2 domain |
| View | Download | 0.508 | N/A | N/A | d.93.1 | SH2 domain |
| View | Download | 0.498 | N/A | N/A | b.40.4 | Nucleic acid-binding proteins |
| View | Download | 0.492 | N/A | N/A | d.93.1 | SH2 domain |
| View | Download | 0.487 | N/A | N/A | b.55.1 | PH domain-like |
| View | Download | 0.465 | N/A | N/A | b.55.1 | PH domain-like |
| View | Download | 0.465 | N/A | N/A | b.55.1 | PH domain-like |
| View | Download | 0.463 | N/A | N/A | b.61.3 | D-aminopeptidase, middle and C-terminal domains |
| View | Download | 0.463 | N/A | N/A | b.61.3 | D-aminopeptidase, middle and C-terminal domains |
| View | Download | 0.289 | N/A | N/A | d.93.1 | SH2 domain |
| View | Download | 0.252 | N/A | N/A | d.93.1 | SH2 domain |
| View | Download | 0.228 | N/A | N/A | d.93.1 | SH2 domain |
| View | Download | 0.225 | N/A | N/A | d.93.1 | SH2 domain |
|
Region A: Residues: [354-540] |
1 11 21 31 41 51
| | | | | |
1 LEGLPEETED IEPYVVIDEN TIQHFSHKEH YLRLNVNGVL CDDNKRCKAC THPICLQSFY 60
61 GCMDCNFILH QNCAGFLRMK WHVLHNERLT LVTNKDEGFR CYACDRLSNG FKYQHGNKAF 120
121 DVRCISISEP HIHPSHPNHP LYYFPSDEVQ WCTGCNMEQD FVLSCIEDNC GFLLCFGCAT 180
181 LPQMVKH
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [541-658] |
1 11 21 31 41 51
| | | | | |
1 RVHDHPLSLC YGEKASGKYW CDICEKETNP HTWFYTCKDH QASLHTKCVL GDLSSLMRRS 60
61 TIKIEGTSYE VVLNNSISRP FCSWCKMHCI FPIILKTLGA TNEYSCSLEC AECRYTDR
|
| Detection Method: | |
| Confidence: | 3.522879 |
| Match: | 1v5nA |
| Description: | Solution Structure of DC1 Domain of PDI-like Hypothetical Protein from Arabidopsis thaliana |
| Matching Structure (courtesy of the PDB): |
|
