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Protein Overview: gi|7267855, gi|1...

General Information:
Name(s) found: gi|7486114 [NCBI NR]
gi|7321052 [NCBI NR]
gi|7267855 [NCBI NR]
gi|15234233 [NCBI NR]
Description(s) found:
Found 13 descriptions.
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  • pir||T10575 hypothetical protein F25E4.170 - Arabidopsis thaliana [NCBI NR]
  • gi|7321052|emb|CAB82160.1| putative protein [Arabidopsis thaliana] [NCBI NR]
  • gi|7267855|emb|CAB78198.1| putative protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15234233|ref|NP_192892.1| DC1 domain-containing protein [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 668 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: intracellular signaling pathway [IEA]
    Molecular Function: zinc ion binding [IEA]
    protein binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEYEEYEEVS LPLIHEHLMM PCNYLTRADC CGRFGFTSGG YYCESCSFLV HRKCVEDSSE  60
   61 YIEHPSHSVH PLKLQSKPDH ICDICDKRIV DLCYHCEICD FNVDLYCAKY PPPKVIDISE 120
  121 THHHKLTLLK KGIKFDCGAS KCGEVMYGFP YKCHECDLAF HVDCVWNPPE AKNPSEVNHS 180
  181 HHPLHPLKLH IGQPPDYSDG KCRLCAQKIC DRLFYHCSAC NFSLDMCCLL NPPSQYVMDL 240
  241 KVHAHELTFR PRLDSFTCNA CGLSGDRNPY ICVQCDFMIH QECLDLPRLI NINRHDHRVS 300
  301 RTSVLGVVNS VCGVCRRKVD WTWGGYSCQR CPHYVVHSKC ATREDVWNGK ELEGVPEEIE 360
  361 DVEPYVVIDE NTIQHFSHKE HYLRFHVSAL LWEENKRCNA CTQPIGLQSF YGCVVCDFIL 420
  421 HQNCAESPRK KWHFLHNERL TLVTSKDDYF HCTACDRLSN GFMYQCGDMK LDVLCGSISE 480
  481 PFVHPSHPHH PLYYIPPEEE KQCNGCDNWS SLVLTCIESG CRYFLCFDCA RLPQVVKHRV 540
  541 DAHPLSLCYG EKASGKYWCD ICEKETNPST WFYTCKDHRA SLHTKCVMGD FARLMPGSTL 600
  601 TYSHISYEVV RNNSMSRPFC RACESHCMYP IILKVLGSSA LYICSLNCVD GFWYPKIVSG 660
  661 IKKRQPAK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..120] FFAS03 2.73 Solution Structure of DC1 Domain of PDI-like Hypothetical Protein from Arabidopsis thaliana
    2 View Details [121..195] PSI-BLAST 4.69897 Crystal Structure of the Human Beta2-Chimaerin
    3 View Details [196..355] FFAS03 2.72 Solution Structure of DC1 Domain of PDI-like Hypothetical Protein from Arabidopsis thaliana
    4 View Details [356..532] MSA 15.161995 View MSA. No confident structure predictions are available.
    5 View Details [533..668] PSI-BLAST 4.39794 Solution Structure of DC1 Domain of PDI-like Hypothetical Protein from Arabidopsis thaliana

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.0196698141692984 bayes_pls_golite062009
    2
    Term Confidence Notes
  • binding
    		•  0.0980674097362609 bayes_pls_golite062009
    3
    Term Confidence Notes
  • binding
    		•  0.0196698141692984 bayes_pls_golite062009
    4 No functions predicted.
    5
    Term Confidence Notes
  • binding
    		•  0.0980674097362609 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.92

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle